Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  323 bits (827), Expect = 2e-92
 Identities = 211/603 (34%), Positives = 333/603 (55%), Gaps = 30/603 (4%)

Query: 2   PSIRRLSLMLWVMFIVLVSMSTHLYWRFQYQALLNEHQS---QLDRFSSHIVATLDKYAH 58
           P  ++  LM  V+   L ++    YW   +Q  +   Q    QL    S +   L +Y  
Sbjct: 6   PKAKQRLLMTIVLLAGLFAILKLTYWVHFHQGKIEIQQQSERQLKELVSFLDGALSRYES 65

Query: 59  IPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSNWNL 118
           IPH++S +  L + L   QN  ++   N YLE++  V +A+D YLID  G  IA+SNW  
Sbjct: 66  IPHVLSTNPMLANVLNDQQNPKKVQELNLYLEEIQHVTEASDIYLIDALGIAIAASNWQQ 125

Query: 119 DRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIY--AAEILGVIVVKM 176
             SFIG+++++RPY+  +I+G   +Y+A+G++S +RG+Y++YP+    A  ILG I+VK+
Sbjct: 126 SFSFIGKDYSFRPYYTDAISGNLGRYYAVGTSSDKRGFYFSYPIYQQGAKGILGAIIVKV 185

Query: 177 DLSAIEQGWQSKS------SYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQ 230
           D++ IEQ  QS S        F+ +D   +VF+SS   W   S+  L+ A+   +  S++
Sbjct: 186 DIADIEQ--QSTSIAMAGQYQFLISDPDDIVFISSVDEWRLASLTPLTQAKQYALNASKR 243

Query: 231 YLDSPIPSLGWQGDLQAE---QSEWRKPEKHWLQDDYIVSSRPLPELALTIRVLSPKIEL 287
           Y + PI  L  +   Q +        +      Q  Y+ +   + +    + +L+P   L
Sbjct: 244 YAERPIGELLIKPQYQEDSLSNGHIYQIRSGNSQAQYMDTHHLMTKAGWRVHILAPMKPL 303

Query: 288 FWSAFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTAKLHAE 347
             S   L+++   ++ ++ LG  L+   + R  Q  QL Q     LE  V ERT  L   
Sbjct: 304 LESMPALMLLSASIYLLLALGL-LFSSERRRNLQRMQLAQSL---LEQRVEERTQDLQ-- 357

Query: 348 IAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNK 407
                +    L+ TQDELIQAAKL V+G +SASI+HELN PLAA+RS+A N + FLA N 
Sbjct: 358 -----QANDRLKDTQDELIQAAKLTVIGSLSASINHELNQPLAALRSYAQNTQTFLARNM 412

Query: 408 PERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQ 467
           P++A +NL  I  LT+R+A I  Q KSF RKS   +     L   I  A  ++  +   Q
Sbjct: 413 PDKASDNLKIIIELTDRLADIVGQFKSFTRKSQGTDSA-TDLKGCIKQALTIVQPEIDKQ 471

Query: 468 MTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQIALFV 527
              L++   E    V  + ++L+QV +N+++NA+ A++  ++R + IR+  ++ +  + +
Sbjct: 472 GVELDVLLPEGQYQVWGDKVRLQQVFVNIMSNAIVAMQQSSKRTLSIRVNCAD-KFCISI 530

Query: 528 DDNGPGVGIETLPHLFEPFHTT-KKNGLGLGLSISQQILHSMQGTLSVATSPLGGARFTI 586
            D+GPGV    +  +FEP+ TT ++ GLGLGLSISQ+I+ SMQG ++VA +  GGA F I
Sbjct: 531 QDSGPGVRESQMEKIFEPYFTTSERTGLGLGLSISQRIIESMQGQINVANAEDGGAIFHI 590

Query: 587 TLP 589
            LP
Sbjct: 591 ILP 593