Pairwise Alignments

Query, 433 a.a., trigger factor from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., trigger factor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  546 bits (1406), Expect = e-160
 Identities = 273/429 (63%), Positives = 338/429 (78%), Gaps = 1/429 (0%)

Query: 1   MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
           MQV+VE  +GL+RRL I+VPA  IE  V   L+  AK  R  GFR GKVP+ ++ K YG 
Sbjct: 1   MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60

Query: 61  AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEIGEGKDLVFTATFEVYPEVELKGL 120
           A+RQD+ GEVMQR+FIEAI+ EK+NPAGAPTF P    +G+   F ATFE+YPEVELKGL
Sbjct: 61  AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFVPGAT-DGEKFEFVATFEIYPEVELKGL 119

Query: 121 ENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGSIDGVEFEGG 180
           + I VE+P A VTDADV  M+ETLRKQ AT+  V+  A +G +V ++FVGS+DGVEFEGG
Sbjct: 120 DAIVVEQPKASVTDADVDSMIETLRKQHATFAAVEREAVDGDKVKMNFVGSVDGVEFEGG 179

Query: 181 KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKV 240
           KAE+F L++G+GRMIPGFE GI+G   G EFVIDVTFPE+YHAENLKGKAAKFAI + +V
Sbjct: 180 KAEDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVTFPEEYHAENLKGKAAKFAITLTEV 239

Query: 241 EARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEI 300
            A  LPE+NDEF A FG+ EGG++ALK E+RKNM REL+QA+KA +KEQ I GL+  N+I
Sbjct: 240 LAANLPEVNDEFAALFGITEGGLEALKTEIRKNMNRELEQALKANVKEQVIAGLLANNDI 299

Query: 301 QVPSALIDQEINVLRQQAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHEL 360
           ++P ALID E+NVLRQQA QRFGG      +LP ELF EQA RRV +GLLLGEVI+T+EL
Sbjct: 300 ELPKALIDGEVNVLRQQAMQRFGGQTANMPELPAELFTEQAARRVKIGLLLGEVIKTNEL 359

Query: 361 KADEEKVKALITEMATAYEDPSEVVSYYEQNQQLMNNMRNVALEEQAVDAIIAKAKVTEK 420
           KA++E+V+ LI  MA+AYEDPSEV++YY  N++LM NMRNVALEEQAV+A++  AKVTEK
Sbjct: 360 KAEDERVQGLIASMASAYEDPSEVIAYYNSNKELMQNMRNVALEEQAVEALLKTAKVTEK 419

Query: 421 AISFSELMN 429
            ++F E MN
Sbjct: 420 TVAFEEFMN 428