Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Pseudomonas fluorescens FW300-N2E2

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 27/227 (11%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   L+ ++IGQ+ AK+ +A+A+ N ++R++  +     VE+   NIL+IGPTG G
Sbjct: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELR--VEVTPKNILMIGPTGVG 61

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186
           KT +A  LA+L + PF   +AT  TE GYVG DVE+II+        D+A A   ++   
Sbjct: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIR--------DLADAAIKLLREQ 113

Query: 187 EIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKIL 246
           EI K+  ++E      D + E +  ALL          PP     +      Q   ++ L
Sbjct: 114 EITKVRHRAE------DAAEERILDALL----------PPARMGFNADAAATQDSNTRQL 157

Query: 247 FICGGAFAGL-DKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQV 292
           F        L DK IE  VA   G+   A    ++ +  L  LF  +
Sbjct: 158 FRKRLREGQLDDKEIEIEVAEMAGVDISAPPGMEEMTNQLQSLFANM 204



 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 80/263 (30%), Positives = 115/263 (43%), Gaps = 62/263 (23%)

Query: 158 EDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLI 217
           E+   ++ +   K     A  + GIV+IDEIDK++++        DVS EGVQ+ LL LI
Sbjct: 226 EEASRLVNEEELKAKALEAVEQHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLI 283

Query: 218 EGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVR 277
           EG   +            +   V T  ILFI  GAF                        
Sbjct: 284 EGCTVNT-----------KLGMVKTDHILFIASGAFH----------------------- 309

Query: 278 SKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTK 337
                  LS+      P DLV     PE  GRLP+   L  L      +IL EP  +LT+
Sbjct: 310 -------LSK------PSDLV-----PELQGRLPIRVELKALTPEDFERILSEPHASLTE 351

Query: 338 QYAALFELENVDLEFREDALKAIA--AKAMKRKT---GARGLRSILEAVLLETMY---EL 389
           QY AL + E +++EF  + +K +A  A  +  KT   GAR L ++LE +L E  +   +L
Sbjct: 352 QYCALLKTEGLNIEFTPEGIKRLAQIAWQVNEKTENIGARRLHTLLERLLEEVSFSAGDL 411

Query: 390 PSMEEVSKVVIDESVINGESAPL 412
            S    + ++ID   +N     L
Sbjct: 412 ASAHNEAPILIDAEYVNSHLGEL 434