Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Pseudomonas stutzeri RCH2

 Score =  641 bits (1654), Expect = 0.0
 Identities = 334/425 (78%), Positives = 362/425 (85%), Gaps = 2/425 (0%)

Query: 1   MTDKSKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKK 60
           MTD      S KLLYCSFCGKSQHEVRKLIAGPSV+ICDECVDLCNDIIREE+++   + 
Sbjct: 1   MTDTRNGEDSGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEVQEAQAES 60

Query: 61  ESAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLI 120
            +  LP P++I   LD YVIGQE AKK+LAVAVYNHYKRL   D   E VELGKSNILLI
Sbjct: 61  NAHKLPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQRDKKEE-VELGKSNILLI 119

Query: 121 GPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAER 180
           GPTGSGKTLLAETLARLL+VPFT+ADATTLTEAGYVGEDVENIIQKLLQKCDYDV KA+ 
Sbjct: 120 GPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQM 179

Query: 181 GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 240
           GIVYIDEIDKISRKS+NPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
Sbjct: 180 GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 239

Query: 241 DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKY 300
           DT  ILFICGGAFAGL+KVI+ R   G GIGF A+VRSKD  K + E    VEP+DLVK+
Sbjct: 240 DTRNILFICGGAFAGLEKVIQGRSTQG-GIGFNAEVRSKDPGKKIGEALRAVEPDDLVKF 298

Query: 301 GLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAI 360
           GLIPEF+GRLPV ATL ELDEAALIQIL EPKNALTKQYA LFELE VDLEFR DALKAI
Sbjct: 299 GLIPEFVGRLPVIATLDELDEAALIQILTEPKNALTKQYAKLFELEGVDLEFRPDALKAI 358

Query: 361 AAKAMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANES 420
           A++A++RKTGARGLRSILE VLL+TMYE+PS ++VSKVVIDESVI G S PLLIY   E 
Sbjct: 359 ASRALERKTGARGLRSILEGVLLDTMYEIPSQKDVSKVVIDESVIEGTSQPLLIYENTEP 418

Query: 421 QAAGA 425
            A  A
Sbjct: 419 PAKAA 423