Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Heat shock protein HslU from Pseudomonas syringae pv. syringae B728a

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 73/232 (31%), Positives = 112/232 (48%), Gaps = 37/232 (15%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   L+ ++IGQ+ AK+ +A+A+ N ++R++  +     VE+   NIL+IGPTG G
Sbjct: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELR--VEVTPKNILMIGPTGVG 61

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186
           KT +A  LA+L + PF   +AT  TE GYVG DVE+II+        D+A A   ++   
Sbjct: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIR--------DLADAAIKLLREQ 113

Query: 187 EIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL------QV 240
           EI K+  ++E      D + E +  ALL          P Q    + +Q F       Q+
Sbjct: 114 EIVKVRHRAE------DAAEERILDALLPPARVGFNEDPAQSSDSNTRQLFRKRLREGQL 167

Query: 241 DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQV 292
           D               DK IE  +    G+   A    ++ +  L  LF  +
Sbjct: 168 D---------------DKEIEIEINEAVGVDISAPPGMEEMTNQLQSLFANM 204



 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 76/245 (31%), Positives = 109/245 (44%), Gaps = 62/245 (25%)

Query: 176 AKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQ 235
           A  + GIV+IDEIDK++++  +  +  DVS EGVQ+ LL LIEG   +            
Sbjct: 244 AVEQHGIVFIDEIDKVAKRGNSGGV--DVSREGVQRDLLPLIEGCTVNT----------- 290

Query: 236 EFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPE 295
           +   V T  ILFI  GAF                               LS+      P 
Sbjct: 291 KLGMVKTDHILFIASGAFH------------------------------LSK------PS 314

Query: 296 DLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFRED 355
           DLV     PE  GRLP+   L  L      +IL EP  +LT+QY  L + E + +EF+ +
Sbjct: 315 DLV-----PELQGRLPIRVELKALSPQDFERILSEPHASLTEQYRELLKTEGLKIEFKPE 369

Query: 356 ALKAIA--AKAMKRKT---GARGLRSILEAVLLETMY---ELPSMEEVSKVVIDESVING 407
            +K +A  A  +  KT   GAR L ++LE +L E  +   +L    + + + ID   +N 
Sbjct: 370 GIKRLAEIAWQVNEKTENIGARRLHTLLERLLEEVSFSAGDLAISPDAAPIEIDAEYVNS 429

Query: 408 ESAPL 412
               L
Sbjct: 430 HLGDL 434