Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., ATP-dependent protease ATP-binding subunit HslU from Sinorhizobium meliloti 1021

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 2/103 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           +PR+I   LD Y+IGQ+ AK+ +A+A+ N ++R +  D   +  E+   NIL+IGPTG G
Sbjct: 5   SPREIVSELDRYIIGQKDAKRAVAIALRNRWRRQQLDDELRD--EVMPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
           KT ++  LA+L   PF   +AT  TE GYVG DVE I++ L++
Sbjct: 63  KTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIVRDLVE 105



 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 75/222 (33%), Positives = 103/222 (46%), Gaps = 60/222 (27%)

Query: 175 VAKAER-GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHP 233
           VA AE  GIV++DEIDKI+ +     I   VS EGVQ+ LL L+EGT  +          
Sbjct: 236 VAAAENDGIVFLDEIDKIATREGG--IGAGVSREGVQRDLLPLVEGTTVAT--------- 284

Query: 234 QQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVE 293
             ++  V T  ILFI  GAF          VA                           +
Sbjct: 285 --KYGPVKTDHILFIASGAF---------HVA---------------------------K 306

Query: 294 PEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFR 353
           P DL     +PE  GRLP+   L  L +    +IL E + +L +QY AL E E V L+F 
Sbjct: 307 PSDL-----LPELQGRLPIRVELRALTKEDFRRILTETEASLIRQYKALLETEGVALDFT 361

Query: 354 EDALKAIAAKAMK-----RKTGARGLRSILEAVLLETMYELP 390
           EDA+ A+A  A++        GAR L++++E VL +  +  P
Sbjct: 362 EDAIDALAEVAVQLNANVENIGARRLQTVMERVLDDVSFNAP 403