Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., ATP-dependent protease ATP-binding subunit ClpX (RefSeq) from Shewanella amazonensis SB2B

 Score =  690 bits (1781), Expect = 0.0
 Identities = 345/423 (81%), Positives = 382/423 (90%), Gaps = 1/423 (0%)

Query: 4   KSKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESA 63
           ++K G   KLLYCSFCGKSQHEVRKLIAGPSVY+CDECV+LCNDIIREEIK++ PK++  
Sbjct: 3   ENKTGDGGKLLYCSFCGKSQHEVRKLIAGPSVYVCDECVELCNDIIREEIKEISPKRDQD 62

Query: 64  ALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPT 123
            LPTP ++R HLDDYVIGQE AKKVL+VAVYNHYKRLRN     +GVELGKSNILLIGPT
Sbjct: 63  KLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAGP-KDGVELGKSNILLIGPT 121

Query: 124 GSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIV 183
           GSGKTLLAETLAR L+VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDV KA+RGIV
Sbjct: 122 GSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIV 181

Query: 184 YIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTS 243
           YIDEIDKISRKS+NPSITRDVSGEGVQQALLKLIEGTVA+VPPQGGRKHPQQEFLQVDTS
Sbjct: 182 YIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTS 241

Query: 244 KILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLI 303
           KILFICGGAFAGL+KVIEQR  TG+GIGFGA V+ K+  +++S++ +QVEPEDLVKYGLI
Sbjct: 242 KILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVKGKEEKESMSDILSQVEPEDLVKYGLI 301

Query: 304 PEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAK 363
           PEFIGRLPV ATL ELDE ALIQIL EPKNALTKQYAALFE+ENV+LEFREDALKAIA K
Sbjct: 302 PEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIAQK 361

Query: 364 AMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANESQAA 423
           AM RKTGARGLRSI+E +LL+TMY+LPS + VSK V+DESV+ GESAP+LIY   ESQAA
Sbjct: 362 AMSRKTGARGLRSIVEGILLDTMYDLPSQQGVSKAVVDESVVKGESAPILIYEQTESQAA 421

Query: 424 GAE 426
             +
Sbjct: 422 SGD 424