Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., ATP-dependent protease ATP-binding subunit HslU (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD ++IGQ+ AK+ +AVA+ N ++R++         E+   NIL+IGPTG G
Sbjct: 5   TPREIVHELDAHIIGQQKAKRSVAVALRNRWRRMQLDAALRH--EVTPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
           KT +A  LA+L + PF   +AT  TE GYVG++VE II+ L
Sbjct: 63  KTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDL 103



 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 76/233 (32%), Positives = 101/233 (43%), Gaps = 60/233 (25%)

Query: 179 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           + GIV+IDEIDKI ++ E      DVS EGVQ+ LL L+EG   +       KH      
Sbjct: 247 QHGIVFIDEIDKICKRGETSG--PDVSREGVQRDLLPLVEGCTVNT------KHGM---- 294

Query: 239 QVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLV 298
            V T  ILFI  GAF                                       +P DL 
Sbjct: 295 -VKTDHILFIASGAFQ------------------------------------MSKPSDL- 316

Query: 299 KYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALK 358
               IPE  GRLP+   L  L  +   +IL EP  +LT+QY AL   E V +EF E  + 
Sbjct: 317 ----IPELQGRLPIRVELDALTASDFKRILTEPHASLTEQYVALMATEGVTIEFTETGID 372

Query: 359 AIAAKAMK-----RKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVIN 406
            IA  A +        GAR L +++E ++ +  +E  S +  SK  ID   +N
Sbjct: 373 RIAQAAWQVNERTENIGARRLHTVMERLMEDISFE-ASDKSGSKFTIDADYVN 424