Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., ClpX, ATPase regulatory subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  578 bits (1491), Expect = e-170
 Identities = 298/422 (70%), Positives = 345/422 (81%), Gaps = 4/422 (0%)

Query: 4   KSKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESA 63
           KS  G S   LYCSFCGKSQHEVRKLIAGP+V+ICDECV+LC DIIREE K  L K    
Sbjct: 3   KSSGGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREEHKTSLVKSRDG 62

Query: 64  ALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPT 123
            +P+P+ I + LDDYVIGQ+HAKKVL+VAV+NHYKRL      S+ VEL KSNILLIGPT
Sbjct: 63  -VPSPKDILKVLDDYVIGQQHAKKVLSVAVHNHYKRLSQAGKNSD-VELAKSNILLIGPT 120

Query: 124 GSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIV 183
           G GKTLLA+TLAR+LDVPFTMADATTLTEAGYVGEDVENII KLLQ  DY+V +A+RGIV
Sbjct: 121 GCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIV 180

Query: 184 YIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTS 243
           YIDEIDKISRKS+NPSITRDVSGEGVQQALLK++EGTVASVPPQGGRKHPQQEFLQVDT+
Sbjct: 181 YIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTT 240

Query: 244 KILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLI 303
            ILFICGGAFAGLD++I  R   G+ IGFGADVR  +  +T  E+   VEPEDL+KYGLI
Sbjct: 241 NILFICGGAFAGLDRIISAR-GKGSSIGFGADVRDPEARRT-GEVLRAVEPEDLLKYGLI 298

Query: 304 PEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAK 363
           PEF+GRLPV ATL +LDE AL+ IL  PKNAL KQY  LFE+E+  L F+EDAL+ IA K
Sbjct: 299 PEFVGRLPVLATLDDLDEDALVDILTTPKNALVKQYQRLFEMESTQLSFKEDALRCIALK 358

Query: 364 AMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANESQAA 423
           A+ RKTGARGLRSI+E +LL+TM++LP ME V +VV+++ V+ G + PL IYS   + A 
Sbjct: 359 AIARKTGARGLRSIMEGILLDTMFDLPGMEGVEEVVVNKEVVEGRAKPLFIYSDQRTSAD 418

Query: 424 GA 425
           GA
Sbjct: 419 GA 420