Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Phaeobacter inhibens DSM 17395

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 7/146 (4%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD ++IGQ  AK+ +AVA+ N ++R + GD   +  E+   NIL+IGPTG G
Sbjct: 5   TPREIVSELDRFIIGQTDAKRAVAVALRNRWRRKQLGDDLRD--EVYPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186
           KT ++  LA+L   PF   +AT  TE GYVG DVE II+ L+     D+A  +      D
Sbjct: 63  KTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLV-----DIAIVQTREHMRD 117

Query: 187 EIDKISRKSENPSITRDVSGEGVQQA 212
           ++   +R++    +   ++G   + A
Sbjct: 118 DVKAKARQAAEERVIDAIAGTDARDA 143



 Score = 87.8 bits (216), Expect = 6e-22
 Identities = 78/246 (31%), Positives = 107/246 (43%), Gaps = 71/246 (28%)

Query: 156 VGEDVENIIQKLLQKCDYDVAKA------ERGIVYIDEIDKISRKSENPSITRDVSGEGV 209
           +GE+ + ++       D  V KA      + GIV++DEIDK+  + +      DVS EGV
Sbjct: 219 IGEEADKLLD------DETVTKAALESVEQNGIVFLDEIDKVCTRQDARG--GDVSREGV 270

Query: 210 QQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTG 269
           Q+ LL LIEGT  S       KH       V T  ILFI  GAF          +A    
Sbjct: 271 QRDLLPLIEGTTVST------KHGP-----VKTDHILFIASGAF---------HIA---- 306

Query: 270 IGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILC 329
                                  +P DL     +PE  GRLP+   L  L E   ++IL 
Sbjct: 307 -----------------------KPSDL-----LPELQGRLPIRVNLRALSEEDFVRILT 338

Query: 330 EPKNALTKQYAALFELENVDLEFREDALKAIAAKAMK-----RKTGARGLRSILEAVLLE 384
           E  NALT QY AL   E V++ F +D + ++A  A +        GAR L +++E V  E
Sbjct: 339 ETDNALTLQYTALLGTEEVNVSFTDDGIASLAKIAAEVNQTVENIGARRLYTVIERVFEE 398

Query: 385 TMYELP 390
             +  P
Sbjct: 399 LSFSAP 404