Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ATP-dependent protease ATP-binding subunit (RefSeq) from Shewanella loihica PV-4

 Score =  691 bits (1784), Expect = 0.0
 Identities = 349/426 (81%), Positives = 384/426 (90%), Gaps = 1/426 (0%)

Query: 1   MTDKSKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKK 60
           M D    G S KLLYCSFCGKSQHEVRKLIAGPSVY+CDECV+LCNDIIREEI+++ PK+
Sbjct: 1   MGDNKSNGDSGKLLYCSFCGKSQHEVRKLIAGPSVYVCDECVELCNDIIREEIREISPKQ 60

Query: 61  ESAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLI 120
           +   LPTP ++R HLDDYVIGQE AKKVL+VAVYNHYKRL+N  T  +GVELGKSNILLI
Sbjct: 61  DQDRLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNA-TPKDGVELGKSNILLI 119

Query: 121 GPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAER 180
           GPTGSGKTLLAETLAR L+VPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDV KA+R
Sbjct: 120 GPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQR 179

Query: 181 GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 240
           GIVYIDEIDKISRKS+NPSITRDVSGEGVQQALLKLIEGTVA+VPPQGGRKHPQQEFLQV
Sbjct: 180 GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQV 239

Query: 241 DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKY 300
           DTSKILFICGGAFAGL+KVIEQR   GTGIGFGA+V+ + +  T+S++  QVEPEDLVKY
Sbjct: 240 DTSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVKGEADKATISDVLLQVEPEDLVKY 299

Query: 301 GLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAI 360
           GLIPEFIGRLPV ATL ELDEAALIQIL EPKNALTKQ+AALFE+E V+LEFREDALKAI
Sbjct: 300 GLIPEFIGRLPVLATLAELDEAALIQILSEPKNALTKQFAALFEMEGVELEFREDALKAI 359

Query: 361 AAKAMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANES 420
           A KAM RKTGARGLRSI+E +LL+ MY+LPS E V+KVVIDESV+ GESAP+LIY ANE+
Sbjct: 360 ALKAMDRKTGARGLRSIVEGILLDIMYDLPSTENVAKVVIDESVVKGESAPILIYEANET 419

Query: 421 QAAGAE 426
           QAA AE
Sbjct: 420 QAAVAE 425