Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., ATP-dependent protease HslVU, ATPase subunit from Dechlorosoma suillum PS

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 6/105 (5%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGV--ELGKSNILLIGPTG 124
           TP++I   LD +++GQ  AKK +A+A+ N ++R +      EG+  E+   NIL+IGPTG
Sbjct: 5   TPQEIVHELDKHIVGQAQAKKAVAIALRNRWRRSQ----VEEGLRHEITPKNILMIGPTG 60

Query: 125 SGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
            GKT +A  LARL + PF   +AT  TE GYVG DV+ II+ L++
Sbjct: 61  VGKTEIARRLARLANAPFIKIEATKFTEVGYVGRDVDTIIRDLME 105



 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 70/214 (32%), Positives = 96/214 (44%), Gaps = 59/214 (27%)

Query: 179 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           + GIV++DEIDKI+ +S+      DVS +GVQ+ LL L+EGT  S            ++ 
Sbjct: 251 QNGIVFLDEIDKIASRSDAHGA--DVSRQGVQRDLLPLVEGTTVST-----------KYG 297

Query: 239 QVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLV 298
            V T  ILFI  GAF                                       +P DL 
Sbjct: 298 MVKTDHILFIASGAFH------------------------------------LAKPSDL- 320

Query: 299 KYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALK 358
               IPE  GRLP+   L  L  +   QIL +    LT+QY AL   E + LEF  D +K
Sbjct: 321 ----IPELQGRLPIRVELDSLSVSDFEQILTQTDACLTRQYQALLGTEGLKLEFTADGIK 376

Query: 359 AIA--AKAMKRKT---GARGLRSILEAVLLETMY 387
            +A  A ++  KT   GAR L +++E +L E  +
Sbjct: 377 RLAEIAYSVNEKTENIGARRLYTVMEKLLEEVSF 410