Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., ATP-dependent protease ATP-binding subunit HslU from Klebsiella michiganensis M5al

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 10/130 (7%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD ++IGQ+ AK+ +A+A+ N ++R++  +      E+   NIL+IGPTG G
Sbjct: 5   TPREIVSELDKHIIGQDAAKRSVAIALRNRWRRMQLNEELRH--EVTPKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186
           KT +A  LA+L + PF   +AT  TE GYVG++V++II+        D+  A   +V + 
Sbjct: 63  KTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIR--------DLTDAAIKMVRMQ 114

Query: 187 EIDKISRKSE 196
            IDK   ++E
Sbjct: 115 SIDKNRYRAE 124



 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 80/242 (33%), Positives = 107/242 (44%), Gaps = 58/242 (23%)

Query: 156 VGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLK 215
           + E+   ++     K D   A  + GIV+IDEIDKI ++  N S   DVS EGVQ+ LL 
Sbjct: 226 IEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGGNSS-GPDVSREGVQRDLLP 284

Query: 216 LIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAD 275
           L+EG   S       KH       V T  ILFI  GAF         +VA+         
Sbjct: 285 LVEGCTVST------KHGM-----VKTDHILFIASGAF---------QVAS--------- 315

Query: 276 VRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNAL 335
                             P DL     IPE  GRLP+   L  L      +IL EP  ++
Sbjct: 316 ------------------PSDL-----IPELQGRLPIRVELKALTTHDFERILTEPNASI 352

Query: 336 TKQYAALFELENVDLEFREDALKAIAAKAMK-----RKTGARGLRSILEAVLLETMYELP 390
           T QY AL   E V++EF E+ +K IA  A +        GAR L ++LE ++ +  Y+  
Sbjct: 353 TVQYKALMATEGVNIEFTEEGIKRIAQAAWQVNETTENIGARRLHTVLERLIEDISYDAS 412

Query: 391 SM 392
            M
Sbjct: 413 EM 414