Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., heat shock protein HslVU, ATPase subunit HslU (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 94.0 bits (232), Expect = 8e-24
 Identities = 47/103 (45%), Positives = 70/103 (67%), Gaps = 2/103 (1%)

Query: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126
           TPR+I   LD +V+GQE AK+++AVA+ N ++R R   +  +  E+   NI+++GPTG G
Sbjct: 5   TPREIVSELDRFVVGQEKAKRMVAVAMRNRWRRQRLEPSLRD--EVAPKNIIMMGPTGVG 62

Query: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
           KT +A  LARL   PF   +AT  TE GYVG DVE++++ L++
Sbjct: 63  KTEIARRLARLCGAPFIKVEATKYTEVGYVGRDVESMVRDLME 105



 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 58/217 (26%)

Query: 179 ERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           + GI++IDE+DK++   E    T D+S EGVQ+ LL ++EG+V +            ++ 
Sbjct: 246 QTGIIFIDELDKVA-SGEGTHRTTDISREGVQRDLLPIVEGSVVNT-----------KYG 293

Query: 239 QVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLV 298
            V T  ILFI  GAF                                   F++  P DL 
Sbjct: 294 MVRTDHILFIAAGAFH----------------------------------FSK--PSDL- 316

Query: 299 KYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALK 358
               IPE  GR P+   L  L      +IL EP NALT+QYAAL   E V + F +D L+
Sbjct: 317 ----IPELQGRFPLRVELDPLGRDEFYRILTEPHNALTRQYAALLATEGVTVSFTDDGLR 372

Query: 359 AIAAKAMK-----RKTGARGLRSILEAVLLETMYELP 390
            IAA A +        GAR L +++E +L +  ++ P
Sbjct: 373 EIAAFAEEVNEETENIGARRLYTMMERILADISFDAP 409