Pairwise Alignments

Query, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  498 bits (1283), Expect = e-145
 Identities = 255/411 (62%), Positives = 318/411 (77%), Gaps = 4/411 (0%)

Query: 5   SKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESAA 64
           S  GGS + L CSFC K Q EV++LIAGP VYICDECV LCN+I+  E  D   ++E   
Sbjct: 3   SNTGGSDRELRCSFCAKGQDEVKRLIAGPGVYICDECVALCNEIVAHE--DAGEREEMDR 60

Query: 65  LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTG 124
           L TP +I+  LD+YVIGQ  AKK+L+VAV+NHYKR+   +     VEL KSNILLIGP+G
Sbjct: 61  LLTPAEIKARLDEYVIGQHQAKKILSVAVHNHYKRVFYAEALGGEVELEKSNILLIGPSG 120

Query: 125 SGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVY 184
           SGKTLLA+TLAR+L VPF +ADATTLTEAGYVGEDVENI+ +LLQ  DYD+  A +GI+Y
Sbjct: 121 SGKTLLAKTLARVLKVPFAIADATTLTEAGYVGEDVENILVQLLQNADYDIEAAAKGIIY 180

Query: 185 IDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSK 244
           IDEIDKISRK + PSITRDVSGEGVQQALLK+IEGT A++PP+GGRKHPQQEF+++DTS 
Sbjct: 181 IDEIDKISRKGDGPSITRDVSGEGVQQALLKIIEGTEANIPPKGGRKHPQQEFIRMDTSN 240

Query: 245 ILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKYGLIP 304
           ILFI GGAF GLDK+++QR + G  +GFGA V S    + L EL  QV P DLVK+GLIP
Sbjct: 241 ILFILGGAFIGLDKIVDQR-SGGGSMGFGAKV-SNRKDRPLGELLDQVHPNDLVKFGLIP 298

Query: 305 EFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKA 364
           EFIGR+PV   + EL E  LI+IL EPKNAL +QY  LFEL+ V L F  +ALK+IA++A
Sbjct: 299 EFIGRIPVVTHVDELGEEDLIRILTEPKNALVRQYQKLFELDKVTLRFTANALKSIASQA 358

Query: 365 MKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIY 415
           ++RKTGARGLR+++E V+L+ MY LP++E V + +I+ +V+     P+LIY
Sbjct: 359 IERKTGARGLRNVMENVMLDIMYSLPTLEGVKECIINRAVVEKGREPVLIY 409