Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., ATP-dependent protease (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 39/292 (13%)

Query: 518 SEIVIEDSAIVGIIRYYTREAG-VRGLEREISKICRKAVKKILLDKGVKTVVVN------ 570
           +++ +E SA+  +  Y +R A   R L  E   I +  V+  L  K  +    N      
Sbjct: 238 NQLTLEQSALAPLFNYSSRLAEHQRHLSLETLGISQLMVQAALYGKSKQLNGENIAIALA 297

Query: 571 ----QQNLKEFLGVQRFD---YGKAEESNRIGQVNGLAWTEVG----GDLLTIETQSMPG 619
               + N  + L  Q FD        +   IGQ+NGL   +      G+   I      G
Sbjct: 298 RHKTRHNASQSLSAQSFDDNFINLPTQGAMIGQINGLTVLDAAEYTYGEPARITAAVHYG 357

Query: 620 KGKLTQTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEKKDIHVHV----PEGATPKD 675
            G++       ++        + ++ S   ++     F +   +H++      +     D
Sbjct: 358 DGEVADIERKSELGGNIHAKGLMILTSCLYRI-----FGKDAPLHLNANIVFEQSYQEID 412

Query: 676 GPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKL-----LAAHRG-- 728
           G SA +A   AL+S++   P++  +A TG I   G+V  IGG+ EK+     L   RG  
Sbjct: 413 GDSASLAEYCALMSAIAEQPIEQGIAATGAIDQFGQVQAIGGVNEKIEGFFDLCQRRGLT 472

Query: 729 GIKTVLIPKDNERDLEEIPDNVIA----DLQVLPVQWIDEVLKVALEQDPTG 776
           G + V+IP  N + L   P  + A    +  +  V+  D+ + + + + P G
Sbjct: 473 GTQGVIIPASNVQQLNLAPAVIAAVKAKEFHLYQVEHTDQAVAILMNK-PAG 523