Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., response regulator receiver protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  376 bits (965), Expect = e-108
 Identities = 199/479 (41%), Positives = 290/479 (60%), Gaps = 63/479 (13%)

Query: 326 LERVKERILEYLAVQSRINKLKGPILCLVGPPGVGKTSLGRSIAAATGRQYVRMALGGVR 385
           +  ++  + E LA +++    + P+LC  GPPGVGKTS+GR++A A GR++ RM+L  +R
Sbjct: 242 IAELRATVREALADRTQGLSSRAPVLCFTGPPGVGKTSVGRALAEALGRRFYRMSLADLR 301

Query: 386 DEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDP 445
           DEAE+RGHRRTY+G+MPG++IQ +   GV+NP+F+LDEIDK+  D +GDPA ALLEVLDP
Sbjct: 302 DEAELRGHRRTYVGAMPGRIIQALRATGVRNPVFMLDEIDKVGQDAKGDPAMALLEVLDP 361

Query: 446 EQNNSFNDHYLEVDYDLSDVMFVATSNSM-NIPGPLLDRMEVIRLSGYTEDEKLNIAKDH 504
           EQN  F D YLE+ +DLS V+F+AT+N +  + GPLLDRMEV+   GY E +KL+IA   
Sbjct: 362 EQNARFVDRYLEIPFDLSQVLFIATANGVERLRGPLLDRMEVVEFHGYAEADKLDIATRF 421

Query: 505 LVSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVRGLEREISKICRKAVKKILLDKG- 563
           L+ +Q+  +GL      +   A+  II  YT EAGVRGLERE++++CRK + ++ L+ G 
Sbjct: 422 LLPRQLREHGLTAPYPQVTPGALSRIINDYTSEAGVRGLERELARLCRK-LARLRLEAGG 480

Query: 564 ---------------------------------------------VKTVVVNQQNLKEFL 578
                                                          T++V+       L
Sbjct: 481 HAGEPAGGPAGATGATEPTERAEPTKRAERAGGIASGTPSPDAVPSNTLLVDDDVAAALL 540

Query: 579 GVQRFDYGKAEESNRIGQVNGLAWTEVGGDLLTIETQSMPGKGKLTQTGSLGDVMQESIQ 638
           G  R+ +  A    R+G   GL W+E GG+++ +E   M G G+L  TGSLG+V++ES +
Sbjct: 541 GPPRYRHDAAHGVPRVGTATGLVWSEAGGEIVFVEAARMAGSGQLILTGSLGEVLKESAR 600

Query: 639 AAMTVVRSRAEKLGI---------------NPDFYEKKDIHVHVPEGATPKDGPSAGIAM 683
            A++ +R+ A  LG+                      +DIH+H+P G   KDGPSAG+ +
Sbjct: 601 IALSHIRAEAAHLGVPGLSGQADPGHGGQSGQGDTPPQDIHIHIPAGGIAKDGPSAGLTI 660

Query: 684 CTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIKTVLIPKDNERD 742
           C ALVS L+G P +A+VA++GE++L G VLP+ G++EKLLAA R G +TV++P  NE +
Sbjct: 661 CVALVSLLSGRPARADVALSGELSLSGRVLPVSGVREKLLAAARAGARTVVLPAANEAE 719



 Score = 55.5 bits (132), Expect = 1e-11
 Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 9/107 (8%)

Query: 253 LKKKIEESKMPKEARDKAEQELHKLKMMSPMSAEATVVRSYIDWMVNVPWTKRSKVKKDL 312
           L+ +   + +P   R   E E  +++     + E  +  +Y++ ++++PW   ++   DL
Sbjct: 43  LRARCAAADLPDAVRGVVEAETGRMEKTDAAAPENAIALNYVECLLDLPWNGLTRDSLDL 102

Query: 313 SKAEEILNADHYGLERVKERILEYLAVQSRINKLKGPILCLVGPPGV 359
           ++A  + +A H GL +V+ER+LE+LA +         +LC   P  V
Sbjct: 103 ARAAAVFDASHAGLGQVRERVLEHLAAR---------VLCATQPAAV 140