Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 806 a.a., ATP-dependent protease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 80/315 (25%), Positives = 132/315 (41%), Gaps = 78/315 (24%)

Query: 482 DRMEVIRLSGYTED--EKLNIAKDH---LVSKQVERNGLKPSEIVIEDSAIVGIIRYYTR 536
           D +E+ R++   ED  ++ + ++ H    +S  V  N +    +  + SAI  II Y +R
Sbjct: 444 DFIELFRVTADFEDVMDRSDASEAHYARFISSIVHDNNM----LHCDRSAIARIIEYSSR 499

Query: 537 EA-----------GVRGLEREISKICRKAVKKILLDKG-VKTVVVNQQNLKEFLG---VQ 581
           EA            +  L RE S  C KAV    ++K  V+  + NQQ     L    ++
Sbjct: 500 EAQDQQKLSLHSANIANLLRE-SNFCAKAVSSKRIEKQHVEQALKNQQKRVSRLHDNIME 558

Query: 582 RFDYGKA---EESNRIGQVNGL-----------------AWTEVG-GDLLTIETQSMPG- 619
            F  G          +GQ+N L                 A T  G G++L IE +   G 
Sbjct: 559 SFVNGTTLINTHDKVVGQINALSVVSTSEHQFGLPNRITATTAYGKGEVLDIEHRVKLGG 618

Query: 620 ----KGKLTQTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEKKDIHVHVPEGATPKD 675
               KG L  T  L  V+ ++ Q  +T                     ++   +  +  D
Sbjct: 619 RIHSKGVLILTAYLASVLGKTAQIPLTT--------------------YLTFEQSYSGVD 658

Query: 676 GPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKL-------LAAHRG 728
           G SA +A C A++S+++  P++ ++A+TG +   GE  PIGG+ EK+           R 
Sbjct: 659 GDSASMAECCAIISAISELPLRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCQIKGRT 718

Query: 729 GIKTVLIPKDNERDL 743
             + V+IP+ N  +L
Sbjct: 719 SSQGVIIPESNIANL 733