Pairwise Alignments

Query, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., ATP-dependent protease La, truncation (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  400 bits (1029), Expect = e-115
 Identities = 197/450 (43%), Positives = 306/450 (68%), Gaps = 9/450 (2%)

Query: 326 LERVKERILEYLAVQSRINKLKGPILCLVGPPGVGKTSLGRSIAAATGRQYVRMALGGVR 385
           L+ ++  + + L  +    +++ P+LC VGPPGVGKTS+G++IA A  R +VR++L  +R
Sbjct: 243 LDDLRAAVADVLRGRRARYRMRAPLLCFVGPPGVGKTSVGQAIAKAMNRPFVRLSLADLR 302

Query: 386 DEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDP 445
           DEAE+RGHRRTY G+MPG+++Q +   GV+NP+F+LDE+DKM  D R DPA ALLE+LDP
Sbjct: 303 DEAELRGHRRTYAGAMPGRIMQALRTAGVRNPVFMLDEMDKMGQDARSDPAMALLELLDP 362

Query: 446 EQNNSFNDHYLEVDYDLSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKDH 504
           EQN+ F D Y+++ +DLS+VMF+AT+N +  + GPLLDR+EV+  +GY+EDEK +IA   
Sbjct: 363 EQNDRFLDRYVDLPFDLSEVMFIATANDTSRMRGPLLDRLEVVPFAGYSEDEKADIASRF 422

Query: 505 LVSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVRGLEREISKICRKAVKKILLDKGV 564
           L+ +Q+  +GL     V+ D A+  I+R YT EAGVRGLERE++++CRK  +  +     
Sbjct: 423 LLPRQLREHGLVHPRPVVADEALRRIVRDYTDEAGVRGLERELARLCRKLARLHMEGHAP 482

Query: 565 KTVVVNQQNLKEFLGVQRFDYGKAEESNRIGQVNGLAWTEVGGDLLTIETQSMPGKGKLT 624
               ++ + +   LG  R+++ +       G+  GL W+E GG+++ +E  +M G G+L 
Sbjct: 483 LPAGLDAEQVTALLGPARYNHDRTGGGQHTGRATGLVWSEKGGEVIFVEVSTMGGSGQLI 542

Query: 625 QTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEKKDIHVHVPEGATPKDGPSAGIAMC 684
            TGSLGDV++ES + A++ +RS  +  G+    +++ DIH+H+P G   KDGPSAG+ + 
Sbjct: 543 LTGSLGDVLKESARIALSHLRSTPDVFGLRAVPFDRLDIHIHIPAGDVAKDGPSAGVTIA 602

Query: 685 TALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIKTVLIPKDNERDLE 744
            ALVS L G P +A+VA++GE++L G +LP+ G++EK+LAA RGG +TV++P+ N  D+ 
Sbjct: 603 AALVSRLAGRPARADVALSGELSLGGSLLPVSGIREKVLAAARGGARTVILPRANAPDVA 662

Query: 745 EIPDNVIADLQVLP----VQWIDEVLKVAL 770
               N+ A +Q LP    V  + + L++ L
Sbjct: 663 ----NLRATVQRLPRIELVGSVSDALEIVL 688



 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 29/98 (29%), Positives = 60/98 (61%)

Query: 244 DDAPDEFETLKKKIEESKMPKEARDKAEQELHKLKMMSPMSAEATVVRSYIDWMVNVPWT 303
           ++  ++  TL+ K+  +K+P++A+  AE E+ +++   P  AE  +   Y++ ++++PW+
Sbjct: 35  EETAEDPTTLRGKVAAAKLPEDAQRAAEAEIARMEKTDPSVAEYAIALGYVECLLSLPWS 94

Query: 304 KRSKVKKDLSKAEEILNADHYGLERVKERILEYLAVQS 341
             +    DL  A  + +A H GL +V+ER+LE+LA  +
Sbjct: 95  DMAPASFDLHGAARVFDASHAGLGQVRERVLEHLAAHA 132