Pairwise Alignments

Query, 90 a.a., DNA-binding protein HU-beta from Vibrio cholerae E7946 ATCC 55056

Subject, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (288), Expect = 1e-31
 Identities = 54/90 (60%), Positives = 75/90 (83%)

Query: 1  MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG 60
          MNKT+L+ +IA NADI+KA A RAL +F  A++ ++++GD++++VGFG+F   TRAARTG
Sbjct: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60

Query: 61 RNPKTGEEIKIAEAKVPSFKAGKALKDACN 90
          RNP+TG+EI+IAEA VP FKAGK L+D+ N
Sbjct: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90