Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Pseudomonas fluorescens FW300-N2E2

 Score =  276 bits (707), Expect = 1e-78
 Identities = 198/631 (31%), Positives = 311/631 (49%), Gaps = 28/631 (4%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGN-YLISGGNNAAAKVGNAEISRGDFEQAY 59
           M+  +R+       K I+G+I+      G    +  +  +N AAKV   +IS+ +  QA 
Sbjct: 1   MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFQATTNSNDAAKVNGEKISQNELSQAV 60

Query: 60  QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119
             +R ++  QLG  F   L D   +   R S L  +++  LL Q A       S+  + Q
Sbjct: 61  DMQRRQLMQQLGKDFDASLLDEKML---RDSALKGLIDRKLLLQGAHDAKFAFSEAALDQ 117

Query: 120 LILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 179
           +IL+ P+FQ  G F +  +   +R+ G++   + + L ++++  QL + L GS F    +
Sbjct: 118 VILQTPEFQVDGKFSAERFDQVIRQLGYSRMQFRQMLAQEMLIGQLRAGLAGSGFVTDAQ 177

Query: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239
           V    +L  QTRD  T+ +  +  + K+T  D+E+  YY  + + F  P+QV + Y+EL 
Sbjct: 178 VLAFARLEKQTRDFATLNIKADPASVKLT--DDEVKAYYDQHAKEFMTPDQVVIDYLELK 235

Query: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGND---EQKAQAILDELNA- 295
                 QVSV D   Q  YQ+ +   S  EQR  +HILIE ND   E +A+A ++E+ A 
Sbjct: 236 KASFFDQVSVKDEDLQAAYQKEIANLS--EQRRAAHILIEVNDKVTEAQAKAKIEEIQAR 293

Query: 296 ---GADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDF 352
              G  F  LAKE SQD GSA  GG LG+  P   DP FE A +AL  K QVS  V++DF
Sbjct: 294 LAKGESFEALAKEFSQDPGSANNGGDLGYAGPGVYDPEFEKALYAL-NKDQVSAPVRTDF 352

Query: 353 GYHIIRLDDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFEHSDSLDEAA 412
           G H+I+L  I+AP V  ++ ++  + +EL  QQ    F     +LE  +FE SD L + A
Sbjct: 353 GLHLIKLLGIEAPEVPTFASLKDKLTRELKTQQVEQRFVEATKQLEDASFEASD-LAQPA 411

Query: 413 KAISATVVHTDFISAEQAPEVLTTPAVLQALKSPEVKEDGLNSEVIEVAPEHVVVVRVEE 472
           + +  T+  +     E    +    AV+ A  SPEV ++G NS  IE+ PE VVV+R +E
Sbjct: 412 QDLKLTIHTSAPFGREGGEGIAANRAVVTAAFSPEVLDEGANSTAIELDPETVVVLRAKE 471

Query: 473 FRPETVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGET------DLLAQKGVS 526
            R    LPL+ +   +  QL++      A    ++L+ +L+ G+T      D    K + 
Sbjct: 472 HRKPEQLPLESLAGPIRAQLTKEHASAAAKTRADELIASLRDGKTAMDKPVDGQGWKAIE 531

Query: 527 FGELQMIDRSSPLANTVYAMVKPQEGEK-VYAQAKDFDGNIVVIELSKVESKLTPAYHEQ 585
                       +   ++ M KP+  +K  +      DG+++V+ L+ V     P   E+
Sbjct: 532 AATRNQEGIDPAVLQALFRMPKPESKDKPTFTSVTLPDGSLMVVRLNGVNEAAAPTDEEK 591

Query: 586 IATQ---LERIGSQQDLAGVISVLRQNTDIE 613
              +     R+G QQD A     L    DI+
Sbjct: 592 AEYRRYLASRVG-QQDFAAYRKQLESQADIK 621