Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., survival protein surA (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 269 EQRNVSHILIEGN---DEQKAQAILDEL-----NAGADFATLAKEKSQDLGSAAEGGSLG 320
           E+    HIL++ +    E++A+A+LD+      +  A FA +A++ S+D GSA +GG LG
Sbjct: 284 EEVRARHILLKPSPILSEERAKAMLDQFVTQIKSGEAKFADIARQYSEDPGSATKGGELG 343

Query: 321 WIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDD 361
           W EP+   P F A         ++S   ++  G+HI++L++
Sbjct: 344 WAEPNIYVPEF-AQMLGQLSLDEISAPFRTAHGWHIVQLEE 383



 Score = 55.1 bits (131), Expect = 6e-12
 Identities = 58/288 (20%), Positives = 112/288 (38%), Gaps = 68/288 (23%)

Query: 86  SFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQLILEIPQFQSQGVFDSTAYQATLRRA 145
           + R  V++R++   L  Q A  +GL + D Q+ Q I  I + Q   V      Q  ++  
Sbjct: 67  ALRTQVIERLILTRLQLQMAERVGLHIGDLQLDQAIENIAREQKMTV---AQMQQAIQAE 123

Query: 146 GFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGEVNLQDQLISQTRDIRTITLSLEDFAK 205
           G +   Y E LR+++   ++                +Q Q                   +
Sbjct: 124 GMSFAQYREQLREEITLGEIQ--------------RIQVQ-------------------R 150

Query: 206 KVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELSADGLKAQVSVDDAAAQQYYQEHLDKY 265
           ++ +S +EI+   K   E+  +  + ++ ++ +          ++ A+            
Sbjct: 151 RIQVSPQEINNLVKMIEEQGNKDVEYQIGHILIEVPSNPTSAELESAS------------ 198

Query: 266 STAEQRNVSHILIEGNDEQKAQAILDELNAGADFATLAKEKSQDLGSAAEGGSLGWIEPD 325
                             ++AQA++D LN+G DF ++A   S     A EGG   ++  +
Sbjct: 199 ------------------KRAQAVMDRLNSGNDFRSIAIAASSG-PKALEGGVWDYMNIN 239

Query: 326 TMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDIKAPVVKPYSEV 373
            M P   A      +K  + G +KS  G+HI+++ DI+    +   EV
Sbjct: 240 EM-PTLFAEVIGDAKKDAIIGPIKSGSGFHILKIMDIRGLQTREIEEV 286