Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella loihica PV-4

 Score =  399 bits (1024), Expect = e-115
 Identities = 235/626 (37%), Positives = 362/626 (57%), Gaps = 21/626 (3%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAAKVGNAEISRGDFEQAYQ 60
           M++++REG   +  K IL L+ILSF F GV +YL S    +AA V   EIS+   EQAYQ
Sbjct: 1   MLEKIREGSQGVIAKGILVLVILSFAFTGVSSYLGSSSEPSAATVNGEEISKSALEQAYQ 60

Query: 61  NERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQL 120
           +ER R++ QLGD +  L ++ +Y+AS +++VL+R++ D L++Q AA LGL VSD+Q++  
Sbjct: 61  SERARLEQQLGDMYDTLASNESYLASVKQNVLERLIADKLVDQAAADLGLTVSDQQIKTA 120

Query: 121 ILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGEV 180
           I+  P FQ+ G FD+  Y A +R+ G+    + + +R D+ R QL+  + GSEF L GE 
Sbjct: 121 IMNEPAFQTDGKFDNDRYLALIRQLGYQANSFRDMMRGDMTRRQLVVTVVGSEFVLPGEA 180

Query: 181 NLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELSA 240
               ++  QTRDIR   +  E     V++SDEE + YY+ N   F RPE + + Y+ELSA
Sbjct: 181 EYLAKIQGQTRDIRYHVVDAEPMLATVSVSDEEANTYYQQNQSLFVRPETISLDYIELSA 240

Query: 241 DGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIE-GNDEQ----KAQAILDELNA 295
           + L + + V D  A+ YY E+  +Y   E+R  +HIL+  G+DE     KA+AI+ +L A
Sbjct: 241 NQLASAIQVSDEEAKTYYDENKAQYLQPEKRLAAHILVSLGDDEDAAKAKAEAIMTKLKA 300

Query: 296 GADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYH 355
           G DF  LAK  S D  S  +GG L W E   M+  F+ A FAL EKGQ S +VK+ FGYH
Sbjct: 301 GEDFEALAKSDSDDSFSGEQGGKLDWFEQGVMEAPFDQALFAL-EKGQYSDIVKTSFGYH 359

Query: 356 IIRLDDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFEHSDSLDEAAKAI 415
           II+L D++A    P+  V+  I  ++   +A++ FY  Q  L  +++E  D+L EAAK +
Sbjct: 360 IIKLLDLQAASTSPFEAVKDKIVAQIQQDKAVNEFYTLQQRLSDVSYEVPDTLAEAAKEV 419

Query: 416 SATVVHTDFISAEQAPEVLTTPAVLQALKSPEVKEDGLNSEVIEVAPEHVVVVRVEEFRP 475
              V  +   + + APE L +  VL+A  S  V  DG+NS+VIE+   HVVVVRV +   
Sbjct: 420 GVAVKTSPVFTRDNAPEPLNSADVLKAAFSNTVLLDGMNSDVIELGDNHVVVVRVNKHAA 479

Query: 476 ETVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGE--TDLLAQKGVSFGELQMI 533
              +   +VK+ +VE+L + K  + A +   +++ A+K GE   +++ +  +S GE Q I
Sbjct: 480 AGTMEFADVKATIVERLKQDKANELARDKAQEMMAAIKGGEIPAEMITRTQLSRGE-QGI 538

Query: 534 DRSSPLANTVYAMVKPQEGEKVYAQAKDFDGNIVVI-----ELSKVESKLTPAYHEQIAT 588
           D S  + +  + M +P E + V   A   +G  VVI     +   V+  L  A  +++ +
Sbjct: 539 DTS--IVSKAFEMAQPAE-QFVVDTAALANGYAVVILDKVNQAESVDESLVTALKQRLNS 595

Query: 589 QLERIGSQQDLAGVISVLRQNTDIEY 614
           Q     S+ D   +I+ L+   ++ Y
Sbjct: 596 QY----SENDYRALIAALKAQAEVVY 617