Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  421 bits (1081), Expect = e-122
 Identities = 239/621 (38%), Positives = 356/621 (57%), Gaps = 7/621 (1%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAAKVGNAEISRGDFEQAYQ 60
           M++++R+G   +  K IL L+ILSF FAGV +YL S     AA+V   +I++ + EQAYQ
Sbjct: 1   MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLGSTSEVPAAEVNGDKITKAELEQAYQ 60

Query: 61  NERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQL 120
           +ER RM+ QLG+ F+ L AD  Y+ S ++SVL+R+V D L++Q AA++GLRVSDEQ+ + 
Sbjct: 61  SERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIEA 120

Query: 121 ILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGEV 180
           I   P FQ+ G FD+  YQA LR+ G+ P+ +   +R D+ R QL +AL G+EF L GE 
Sbjct: 121 IKSEPAFQTDGKFDNERYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGEA 180

Query: 181 NLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELSA 240
               +L  QTRDIR + +    F  K +++DE++  YY  N  +F  PE+V + YVEL+A
Sbjct: 181 KQLAELQGQTRDIRYLVVDSAPFLAKASVTDEQVKSYYDANQGQFMSPEKVSLEYVELNA 240

Query: 241 DGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIE-GNDE----QKAQAILDELNA 295
                   V D  AQ YY EH  +Y + E+R  +HILI  G+DE     KA+ +  +L+ 
Sbjct: 241 ADFAKDSKVTDEEAQTYYDEHKAQYVSNEKRLAAHILIALGSDEAAAKAKAEDLAKQLDN 300

Query: 296 GADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYH 355
           GADFA LAK  S+D  SA +GG L W EP  MDP F+ A FAL +KGQ SG+VK+DFG+H
Sbjct: 301 GADFAALAKANSEDTLSAEQGGKLDWFEPGVMDPTFDTALFAL-QKGQHSGVVKTDFGFH 359

Query: 356 IIRLDDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFEHSDSLDEAAKAI 415
           II+L DI+     P+++V+  I  +L +++A+D FY+ QS+L   ++E  D+L E AK +
Sbjct: 360 IIKLLDIQPGTTVPFADVKTKIFAQLQEKKAVDQFYSLQSKLADTSYEVPDTLAETAKVV 419

Query: 416 SATVVHTDFISAEQAPEVLTTPAVLQALKSPEVKEDGLNSEVIEVAPEHVVVVRVEEFRP 475
              +  T   S +  P  L  P V++A  S  V   GLNSEVIE+ P HVVV+R++E   
Sbjct: 420 GVEIKTTPLFSRDDVPAALNKPDVVKAAFSDPVMRQGLNSEVIELEPNHVVVIRMKEHHD 479

Query: 476 ETVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGETDLLAQKGVSFGELQMIDR 535
              +PL EVK+ + E+L + +  + A     +L+  +KAG  D+        G     D 
Sbjct: 480 AGTMPLAEVKADIAERLKQEQANEAARAKAEELMAQVKAGAADVSLTAKTKLGRGAQ-DV 538

Query: 536 SSPLANTVYAMVKPQEGEKVYAQAKDFDGNIVVIELSKVESKLTPAYHEQIATQLERIGS 595
            + +    + M  P     V          +V ++       ++      +  +L    S
Sbjct: 539 DAAIVGKAFQMPTPSAAPVVGTVGLANGYAVVALDKVNAADSVSDELVNALKQRLNAQYS 598

Query: 596 QQDLAGVISVLRQNTDIEYHI 616
           + D  G+I  L+ N  + Y +
Sbjct: 599 EADYRGLIESLKANAKVLYPV 619