Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella sp. ANA-3

 Score =  422 bits (1085), Expect = e-122
 Identities = 248/631 (39%), Positives = 364/631 (57%), Gaps = 27/631 (4%)

Query: 1   MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAAKVGNAEISRGDFEQAYQ 60
           M++++R+G   +  K IL L+ILSF FAGV +YL S  +  AA+V   +I++ + EQAYQ
Sbjct: 1   MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLGSKSDVPAAEVNGDKITKAELEQAYQ 60

Query: 61  NERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQL 120
           +ER RM+ QLG+ F+ L AD  Y+ S ++SVL+R+V D L++Q AA++GLRVSDEQ+   
Sbjct: 61  SERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIITA 120

Query: 121 ILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGEV 180
           I   P FQ+ G FD+  YQA LR+ G+ P+ +   +R D+ R QL +AL G+EF L GE 
Sbjct: 121 IKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGEA 180

Query: 181 NLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELSA 240
               +L  QTRDIR + +    F    +++DE++  YY TN  +F  PE+V + YVEL+A
Sbjct: 181 KQLAELQGQTRDIRYLVVDSAPFLANASVTDEQVKNYYDTNQGQFMSPEKVSLEYVELNA 240

Query: 241 DGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILI-EGNDE----QKAQAILDELNA 295
                   V D  AQ YY EH  +Y + E+R  +HILI  G+DE     KA+ +  +L+ 
Sbjct: 241 ADFAKDSKVTDEEAQAYYDEHKTQYVSNEKRLAAHILIGPGSDEAAAKAKAEDLAKQLDN 300

Query: 296 GADFATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYH 355
           GADFA LAK  S+D  SA +GG L W EP  MDP+F+ A FAL +KGQ S +VK+DFG+H
Sbjct: 301 GADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFDTALFAL-QKGQHSAVVKTDFGFH 359

Query: 356 IIRLDDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAFEHSDSLDEAAKAI 415
           II+L D++     P+++V+  I  +L +++A+D FY+ QS+L   ++E  D+L E AK +
Sbjct: 360 IIKLLDVQPGTTVPFADVKAKIVAQLQEKKAVDQFYSLQSKLADTSYEVPDTLAETAKVV 419

Query: 416 SATVVHTDFISAEQAPEVLTTPAVLQALKSPEVKEDGLNSEVIEVAPEHVVVVRVEEFRP 475
              +  T   S +  P  L  P V++A  S  V   GLNSEVIE+ P HVVV+R++E   
Sbjct: 420 GVEIKATPMFSRDDVPTALNKPDVVKAAFSDTVLRQGLNSEVIELEPNHVVVIRMKEHHD 479

Query: 476 ETVLPLDEVKSQVVEQLSRMKGEQQALELGNQLVTALKAGETDLLAQKGVSFGE-LQMID 534
              +PL EVK+ + E+L + +  + A     +L+T +KAG TD+        G   Q +D
Sbjct: 480 AGTMPLAEVKADIAERLKQDQANEAARAKAQELMTQVKAGATDVSLTAKTKLGRGAQDVD 539

Query: 535 RS---------SPLANTVYAMVKPQEGEKVYAQAKDFDGNIVVIELSKVESKLTPAYHEQ 585
            +         +P A  V   V    G  V A  K       V     V  +L  A  ++
Sbjct: 540 AAIVGKAFQMPTPTATPVVDTVGLANGYAVIALDK-------VNAAESVSDELVNALKQR 592

Query: 586 IATQLERIGSQQDLAGVISVLRQNTDIEYHI 616
           +  Q     S+ D  G+I  L+ N  + Y +
Sbjct: 593 LNAQY----SEADYRGLIESLKANAKVHYPV 619