Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., ribosomal protein S1 from Pseudomonas stutzeri RCH2

 Score =  794 bits (2051), Expect = 0.0
 Identities = 397/544 (72%), Positives = 458/544 (84%), Gaps = 1/544 (0%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           M+ESFA+LFEE L     Q G I+ G VV I+  +V V AGLKSE  IP EQF N  GEL
Sbjct: 1   MSESFAELFEESLKSLDMQPGAIITGIVVDIDGDWVTVHAGLKSEGVIPVEQFYNEQGEL 60

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
            ++VG +V VALDAVEDGFGET+LSREKAKR E+WIVLE A+     V G+INGKVKGGF
Sbjct: 61  TIKVGDEVHVALDAVEDGFGETKLSREKAKRAESWIVLEAAFAAEEVVKGVINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TV++NGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRR+V+E+E+S 
Sbjct: 121 TVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSA 180

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ER+ LLE+LQEG +VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR+KHPSEIVNVGDE
Sbjct: 181 EREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDE 240

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           I VKVLKFDR+R RVSLGLKQLGEDPWVAI  RYPEG ++  RVTNLTDYGCF E+EEGV
Sbjct: 241 IDVKVLKFDRERNRVSLGLKQLGEDPWVAIKARYPEGTRVQARVTNLTDYGCFAELEEGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNIHPSKVV VGDEVEVMVLDIDEERRRISLG+KQCK+NPW+ F+  
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQ 360

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             KGD+++G IKSITDFGIFIGL+GGIDGLVHLSDISWN PGEEAVR FKKGDE+  V+L
Sbjct: 361 FNKGDRISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEPGEEAVRRFKKGDELDTVIL 420

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
           +VD ERERISLGIKQ+E+DPF+ Y + N KG++V GTV  VDAKGA I+L + +E  ++A
Sbjct: 421 SVDPERERISLGIKQLEDDPFSNYAAVNDKGSIVRGTVKEVDAKGAIIDLGNDIEATLKA 480

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATL-NKQDE 539
           SE+SRDR+EDA  +L  GD+VEAK   +DRK+RVI+LSIK+KD  +E++ M  L  KQD 
Sbjct: 481 SEISRDRVEDARNVLKEGDEVEAKIISIDRKSRVISLSIKSKDVEDEKDAMKELRTKQDV 540

Query: 540 AAFG 543
            + G
Sbjct: 541 ESTG 544