Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., SSU ribosomal protein S1P from Pseudomonas syringae pv. syringae B728a

 Score =  785 bits (2028), Expect = 0.0
 Identities = 393/543 (72%), Positives = 456/543 (83%), Gaps = 2/543 (0%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIEN--GYVLVDAGLKSESAIPAEQFKNAAG 58
           M+ESFA+LFEE L     Q G+I+   +V I+   G+V V AGLKSE  IP EQF N AG
Sbjct: 1   MSESFAELFEESLKTLNLQAGSIITAIIVDIDYQAGWVTVHAGLKSEGLIPLEQFHNDAG 60

Query: 59  ELEVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKG 118
           EL +++G +V VALDAVEDGFGET+LSREKAKR E WIVLE A+     V G+INGKVKG
Sbjct: 61  ELTIKIGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG 120

Query: 119 GFTVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESES 178
           GFTV++NGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRR+V+E+E+
Sbjct: 121 GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN 180

Query: 179 SVERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238
           S ER+ LLE+LQEG +VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR+KHPSEIVNVG
Sbjct: 181 SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG 240

Query: 239 DEILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEE 298
           DEI VKVLK+DR+R RVSLGLKQLGEDPWVAI  RYPE  +++ RVTNLTDYGCF E+EE
Sbjct: 241 DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE 300

Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFA 358
           GVEGLVHVSEMDWTNKNIHPSKVV VGDEVEVMVLDIDEERRRISLG+KQCK+NPW+ F+
Sbjct: 301 GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS 360

Query: 359 EAQAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAV 418
               KGDK++G IKSITDFGIFIGL+GGIDGLVHLSDISWN  GEEAVR FKKGDE+  V
Sbjct: 361 GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV 420

Query: 419 VLAVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYI 478
           +L+VD ERERISLGIKQ+E+DPF+ YV+ N KGA+V G V  VDAKGA I L D +E  +
Sbjct: 421 ILSVDPERERISLGIKQLESDPFSEYVTVNDKGAIVRGIVKEVDAKGAIITLADDIEATL 480

Query: 479 RASEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQD 538
           +ASE+SRDR+EDA  +L  G+++EAK   VDRK+RVI+LSIK+KD  +E+E + +L  + 
Sbjct: 481 KASEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDVEDEKEAIQSLRSKP 540

Query: 539 EAA 541
           E A
Sbjct: 541 EVA 543