Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 186 LETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEILVK 244
           ++ L+ G  ++G V N+  +GAFVD+G   DGL+H++ +A + VK P E+V  GD + V+
Sbjct: 644 IKDLKVGMRLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVQVR 703

Query: 245 VLKFDRDRTRVSLGLKQLG 263
           V + D  R R+ L +++ G
Sbjct: 704 VTEVDVARKRIGLSMRKEG 722



 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)

Query: 277 GHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDEVEVMVLDI 335
           G +L G VTN+  +G FV+I    +GLVHVS++ D   K+  P +VV  GD V+V V ++
Sbjct: 650 GMRLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKD--PHEVVKAGDVVQVRVTEV 707

Query: 336 DEERRRISLGLKQ 348
           D  R+RI L +++
Sbjct: 708 DVARKRIGLSMRK 720



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVD 423
           G ++ G + ++  FG F+ +    DGLVH+S ++     ++     K GD +   V  VD
Sbjct: 650 GMRLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFV-KDPHEVVKAGDVVQVRVTEVD 708

Query: 424 AERERISLGIKQ 435
             R+RI L +++
Sbjct: 709 VARKRIGLSMRK 720