Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., 30S ribosomal protein S1 from Sinorhizobium meliloti 1021

 Score =  547 bits (1409), Expect = e-160
 Identities = 268/554 (48%), Positives = 382/554 (68%), Gaps = 5/554 (0%)

Query: 3   ESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEV 62
           + FA L EE   +T   +G + KG V AIE    +VD GLK E  +P ++F   A +  +
Sbjct: 9   DDFAALLEESFAKTDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFGAKAKDGTL 68

Query: 63  QVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTV 122
           +VG +V+V ++ +E+  GE  LSREKA+R E+W  LE  +E    V GII  +VKGGFTV
Sbjct: 69  KVGDEVEVYVERIENALGEAVLSREKARREESWQRLEVKFEAGERVEGIIFNQVKGGFTV 128

Query: 123 ELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVER 182
           +L+G  AFLP S VD+RPIRD   L +    F+++K+D++R N+VVSRR V+E   + +R
Sbjct: 129 DLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVLEESRAEQR 188

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
            E+++ L+EG  V+G+VKN+TDYGAFVDLGG+DGLLH+TDMAW+RV HPSEI+N+G ++ 
Sbjct: 189 SEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVK 248

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEG 302
           V++++ +++  R+SLG+KQL  DPW  I  +YP G K+SG VTN+TDYG FVE+E G+EG
Sbjct: 249 VQIIRINQETHRISLGMKQLESDPWDGIGAKYPVGKKISGTVTNITDYGAFVELEPGIEG 308

Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEAQA 362
           L+H+SEM WT KN+HP K+++   EV+V+VL++D  +RRISLGLKQ   NPWQ+FA +  
Sbjct: 309 LIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPTKRRISLGLKQTLENPWQAFAHSHP 368

Query: 363 KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAV 422
            G +V G++K+ T+FG+FIGL+G +DG+VHLSD+ WN PGE+ + EF KGD + AVVL V
Sbjct: 369 AGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVRAVVLDV 428

Query: 423 DAERERISLGIKQMENDPFN--AYVSDNKKGALVNGTVTAVDAKGATIEL--EDGVEGYI 478
           D ++ERISLGIKQ+  D     A   + +K A+V+  V  V+  G  + L   + V  +I
Sbjct: 429 DVDKERISLGIKQLGRDAVGEAAASGELRKNAVVSAEVIGVNDGGIEVRLVNHEDVTAFI 488

Query: 479 RASEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQD 538
           R +++SRDR E      +VG  V+A+ T   +K+R I LSIKA + AEE+E +A     D
Sbjct: 489 RRADLSRDRDEQRPERFSVGQTVDARVTNFSKKDRKIQLSIKALEIAEEKEAVAQFGSSD 548

Query: 539 E-AAFGNAMADAFK 551
             A+ G+ +  A K
Sbjct: 549 SGASLGDILGAALK 562