Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., 30S ribosomal protein S1 (RefSeq) from Shewanella amazonensis SB2B

 Score =  926 bits (2393), Expect = 0.0
 Identities = 462/554 (83%), Positives = 506/554 (91%)

Query: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60
           MTESFA LFE+ L + +F+ G+IV+GTVVAIENG VLVDAGLKSES IPAEQFKNA G L
Sbjct: 1   MTESFADLFEQSLQQLEFRPGSIVRGTVVAIENGLVLVDAGLKSESPIPAEQFKNAQGVL 60

Query: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120
           E+ VG QVDVALD+VEDGFGETQLSREKAKRHEAWIVLEKAYE+A TVIGIINGKVKGGF
Sbjct: 61  EIAVGDQVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180
           TVELNGIRAFLPGSLVDVRP+RDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESS 
Sbjct: 121 TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA 180

Query: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ERD LLE LQEG  VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
Sbjct: 181 ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300
           I VKVLK+DR+RTRVSLGLKQLGEDPW+ I+KRYPE  +L+GRVTNLTDYGCFVEIEEGV
Sbjct: 241 INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360
           EGLVHVSEMDWTNKNIHPSKVVN+GDEVEV+VLDIDEERRRISLGLKQCK NPW+ FA  
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWEDFANR 360

Query: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420
             KGDKV+GKIKSITDFGIFIGL+GGIDGLVHLSDISWN  GEEAV E+KKGDEI AVVL
Sbjct: 361 YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNATGEEAVSEYKKGDEIEAVVL 420

Query: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480
           +VD ERERISLG+KQ E+DPFN YV D KKGA+VNGTVTAVDAKG T+EL +GVEGYIR 
Sbjct: 421 SVDPERERISLGVKQTEDDPFNGYVGDKKKGAIVNGTVTAVDAKGVTVELAEGVEGYIRV 480

Query: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA 540
           +++SR+R+EDAS + +VGD VEAKF GVDRKNR ++LSI+AKDEA+E+EVMA LNKQ++A
Sbjct: 481 ADISRERVEDASTVFSVGDAVEAKFMGVDRKNRNVSLSIRAKDEADEKEVMANLNKQEDA 540

Query: 541 AFGNAMADAFKAAK 554
              NAMA+AFKAA+
Sbjct: 541 VISNAMAEAFKAAR 554