Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., Ribosomal protein S1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  569 bits (1467), Expect = e-167
 Identities = 273/553 (49%), Positives = 390/553 (70%), Gaps = 2/553 (0%)

Query: 3   ESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGELEV 62
           E+F  L  E L E+   +G+++ GTV+ +   + +VD GLKSE  +P ++F     + E+
Sbjct: 13  ENFESLLNEQLGESGGLEGSVLTGTVIGVSGDFAVVDVGLKSEGRVPLKEFSRGGDDAEI 72

Query: 63  QVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGFTV 122
           ++G  VDV ++  ED  G   LSR+KA+R EAW  LEKA+ +   V G+I+ +VKGGFTV
Sbjct: 73  KIGDTVDVFVERYEDKDGLIVLSRDKARREEAWNELEKAFNDNQRVRGLIHSRVKGGFTV 132

Query: 123 ELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSVER 182
           +L+G  AFLPGS VD+RP+RD   L  +   F+++K+D+ R N+VVSRRAV+E   + ER
Sbjct: 133 DLSGAIAFLPGSQVDIRPVRDIGPLLGQPQVFQILKMDRARGNIVVSRRAVLEETRAEER 192

Query: 183 DELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
            +L+ETL+EG  ++G+VKN+TDYGAFVDLGGVDGLLH+TD++WKR+ HP+E +++G  + 
Sbjct: 193 SKLMETLREGEILEGVVKNITDYGAFVDLGGVDGLLHVTDISWKRINHPTEALSIGQTVK 252

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEG 302
           V+V++F+ +  R+SLG+KQL  DPW  +A +YP G K  GRVTN+TDYG FVE+E GVEG
Sbjct: 253 VQVIRFNAETQRISLGMKQLEADPWEGVAAKYPVGTKFVGRVTNITDYGAFVELEPGVEG 312

Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEAQA 362
           LVHVSEM WT KN+HP K+V+   EVEVM+LD+D ++RRISLGLKQ  ANPW  F E   
Sbjct: 313 LVHVSEMSWTKKNVHPGKIVSTSQEVEVMILDVDPDKRRISLGLKQTMANPWSEFLEGHP 372

Query: 363 KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAV 422
            G +V G+IK+IT+FG+FIGL G IDG++HLSD+ WN  G+EAV+++KKGD + A VL V
Sbjct: 373 IGTEVEGEIKNITEFGLFIGLTGDIDGMIHLSDLDWNRSGDEAVKDYKKGDVVQAKVLDV 432

Query: 423 DAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRASE 482
           D E+ERISLG+KQ+  DP+    +D +K  +V   +T V   G  +++ +G  G+IR S+
Sbjct: 433 DVEKERISLGVKQLGEDPYREATADLRKNQIVTCVITMVQENGIEVDV-NGAIGFIRKSD 491

Query: 483 VSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDE-AA 541
           ++R+R +       VG+KV+AK   +D+ NR + LSIKA++  EE++ MA     D  A+
Sbjct: 492 LARERADQRPERFAVGEKVDAKVINMDKSNRRMTLSIKAREMDEEKQAMAEYGSADSGAS 551

Query: 542 FGNAMADAFKAAK 554
            G+ +  A K A+
Sbjct: 552 LGDILGAALKQAQ 564