Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., transcriptional accessory protein from Dechlorosoma suillum PS

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 3/89 (3%)

Query: 175 ESESSVERD--ELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231
           E +++V +D  E +  LQ G  ++G+V N+  +GAFVD+G   DGL+H++ ++ K VK P
Sbjct: 637 EFKTAVFKDGVEEMRDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSALSTKFVKDP 696

Query: 232 SEIVNVGDEILVKVLKFDRDRTRVSLGLK 260
            E+V  GD + VKVL+ D  R R++L ++
Sbjct: 697 HEVVKAGDIVKVKVLEVDMARKRIALTMR 725



 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 277 GHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDID 336
           G  L G VTN+  +G FV+I    +GLVHVS +  T     P +VV  GD V+V VL++D
Sbjct: 656 GMILEGVVTNVAAFGAFVDIGVHQDGLVHVSALS-TKFVKDPHEVVKAGDIVKVKVLEVD 714

Query: 337 EERRRISLGLK 347
             R+RI+L ++
Sbjct: 715 MARKRIALTMR 725



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 369 GKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVDAERER 428
           G + ++  FG F+ +    DGLVH+S +S     ++     K GD +   VL VD  R+R
Sbjct: 661 GVVTNVAAFGAFVDIGVHQDGLVHVSALSTKFV-KDPHEVVKAGDIVKVKVLEVDMARKR 719

Query: 429 ISLGIK 434
           I+L ++
Sbjct: 720 IALTMR 725