Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., DNA damage response protein (yhgF like) (from data) from Marinobacter adhaerens HP15

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 1/78 (1%)

Query: 184 ELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
           E L  L+ G  ++G V N+T++GAFVD+G   DGL+HI+ ++   VK P E+V  GD + 
Sbjct: 643 ETLSDLKPGMVLEGSVTNVTNFGAFVDIGVHQDGLVHISALSHTFVKDPREVVKAGDIVK 702

Query: 243 VKVLKFDRDRTRVSLGLK 260
           VKV+  D  R R++L ++
Sbjct: 703 VKVMDVDIPRKRIALTMR 720



 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)

Query: 277 GHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDID 336
           G  L G VTN+T++G FV+I    +GLVH+S +  T     P +VV  GD V+V V+D+D
Sbjct: 651 GMVLEGSVTNVTNFGAFVDIGVHQDGLVHISALSHTFVK-DPREVVKAGDIVKVKVMDVD 709

Query: 337 EERRRISLGLK 347
             R+RI+L ++
Sbjct: 710 IPRKRIALTMR 720



 Score = 42.7 bits (99), Expect = 5e-08
 Identities = 24/84 (28%), Positives = 45/84 (53%)

Query: 445 VSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRASEVSRDRIEDASLILNVGDKVEAK 504
           +SD K G ++ G+VT V   GA +++    +G +  S +S   ++D   ++  GD V+ K
Sbjct: 645 LSDLKPGMVLEGSVTNVTNFGAFVDIGVHQDGLVHISALSHTFVKDPREVVKAGDIVKVK 704

Query: 505 FTGVDRKNRVINLSIKAKDEAEEQ 528
              VD   + I L+++  D+  E+
Sbjct: 705 VMDVDIPRKRIALTMRMDDQPGEK 728



 Score = 42.0 bits (97), Expect = 9e-08
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVD 423
           G  + G + ++T+FG F+ +    DGLVH+S +S     ++     K GD +   V+ VD
Sbjct: 651 GMVLEGSVTNVTNFGAFVDIGVHQDGLVHISALSHTFV-KDPREVVKAGDIVKVKVMDVD 709

Query: 424 AERERISLGIKQMENDP 440
             R+RI+L ++ M++ P
Sbjct: 710 IPRKRIALTMR-MDDQP 725