Pairwise Alignments

Query, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

Subject, 783 a.a., uncharacterized protein from Paraburkholderia graminis OAS925

 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 184 ELLETLQEGTEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIL 242
           E +  L  G  ++G+V N+  +GAF+D+G   DGL+H++ M+ K +K P E+V  G  + 
Sbjct: 648 EKVSDLTPGMVLEGVVTNVAAFGAFIDVGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVK 707

Query: 243 VKVLKFDRDRTRVSLGLKQLGEDPWVAIAKR 273
           VKVL+ D  R R++L ++   +D + A A R
Sbjct: 708 VKVLEVDVKRQRIALTMRL--DDEFGAAATR 736



 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 22/255 (8%)

Query: 98  LEKAYEEAATVIGIINGKVKGGFTVELNGIRAFLPGSLVDVR----PIRDTAHLENKELE 153
           L+   E+    +G+            ++G+ A L  ++VD R    P     HL      
Sbjct: 488 LDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREHLR----- 542

Query: 154 FKVIKLDQKRNNVVVSRRAVIESESSVERDELLETLQEGTEVKGIVKNLTDYGAFVDLGG 213
            KV +L  K          +   E+ ++R  +    +    V+ I+  +  +   V LG 
Sbjct: 543 -KVPRLGDKTFEQAAGFLRINNGENPLDRSSVHP--EAYPVVERILAKINKHAGEV-LGN 598

Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEILVKVLKFDRD-RTRVSLGLKQLGEDPWVAIAK 272
            D L  ++   +   +     V    +IL+++ K  RD R        + G    V    
Sbjct: 599 RDALRGLSPAEFVDDRFGLPTVR---DILLELEKPGRDPRPEFKTATFREG----VEKVS 651

Query: 273 RYPEGHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMV 332
               G  L G VTN+  +G F+++    +GLVHVS M  T     P +VV  G  V+V V
Sbjct: 652 DLTPGMVLEGVVTNVAAFGAFIDVGVHQDGLVHVSAMS-TKFIKDPHEVVKAGQIVKVKV 710

Query: 333 LDIDEERRRISLGLK 347
           L++D +R+RI+L ++
Sbjct: 711 LEVDVKRQRIALTMR 725



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVLAVD 423
           G  + G + ++  FG FI +    DGLVH+S +S     ++     K G  +   VL VD
Sbjct: 656 GMVLEGVVTNVAAFGAFIDVGVHQDGLVHVSAMSTKFI-KDPHEVVKAGQIVKVKVLEVD 714

Query: 424 AERERISLGIKQMENDPFNAYVSDNKKGA 452
            +R+RI+L ++   +D F A  + +  GA
Sbjct: 715 VKRQRIALTMRL--DDEFGAAATRSGGGA 741