Pairwise Alignments

Query, 92 a.a., integration host factor subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 91 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.1 bits (157), Expect = 2e-16
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 5/93 (5%)

Query: 1  MTKSELIERLCA--EQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREP 58
          M K++LI+R+    EQ+  S K +   V+ IL+ +   L  GE++ +  FG+F L Y  P
Sbjct: 1  MNKAQLIQRIATSLEQSQASTKPV---VEQILQQIHIALSEGEKVFLPLFGTFELRYHLP 57

Query: 59 RVGRNPKTGDKVELEGKYVPHFKPGKELRERVN 91
          + GRNP+TG+ +E+ G   P FK    L++ +N
Sbjct: 58 KSGRNPQTGEAIEIAGFNQPSFKAATALKQAIN 90