Pairwise Alignments

Query, 389 a.a., lipopolysaccharide assembly protein LapB from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., conserved hypothetical protein from Marinobacter adhaerens HP15

 Score =  218 bits (555), Expect = 2e-61
 Identities = 133/387 (34%), Positives = 211/387 (54%), Gaps = 7/387 (1%)

Query: 6   FLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVD 65
           +LLL +A A GW +G   +   +  ++          L  L ++ SD+AV++F++ L V+
Sbjct: 7   WLLLTVAVAVGWLVGRLGSGDRRSGKTISDEESVKDRLQFLFTNYSDQAVENFVQSLAVN 66

Query: 66  NETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDR 125
            +T+  HL++G+ FR++GE DRAI IHQNL++R  L          +LA+DY+ +G LDR
Sbjct: 67  KDTVSLHLSIGSHFRNKGETDRAILIHQNLLARPELPPRFSPQVTLELARDYLNAGLLDR 126

Query: 126 AEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVK--LGRKRMKVNIAHFY 183
           AE +  QL+ + ++   + QQL  +YQQ +EW KA E A  L +        KV +A+  
Sbjct: 127 AEALLHQLMGDKDYGRHSSQQLIDLYQQEKEWAKAAEVARTLTRGDADPAMFKV-LAYLT 185

Query: 184 CELAMLEKADSNDNKAIQ-LFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMVLE 242
           CEL+  E    +D  A Q L K+AL+ D  CVRA + + KL ++   Y++       V E
Sbjct: 186 CELSE-ESLKQDDRWAAQKLAKEALEYDRSCVRANLIMMKLLVRQGSYREAGSQCLKVFE 244

Query: 243 QDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQ 302
           Q+ +F  E ++ L +  H  G    L   LR+   N    S  L L + V +  G  AA 
Sbjct: 245 QNPEFGPEAIDRLMKLEHEHGDIGRLAKKLRKLYENYPSTSLLLALVESVERASGRPAAI 304

Query: 303 EILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKCGF 362
           ++L ++L   P+++G  RL++  +A  E+G        + R+    L  +P YRC  CGF
Sbjct: 305 DLLRQELETRPSVRGLLRLVE--MAGYEKGMTTDEGRLVSRIGHLILANRPVYRCVSCGF 362

Query: 363 STHSLYWHCPSCKNWGSIKPIRGLDGE 389
           S   L+W CPSCK W +++PI+G++ E
Sbjct: 363 SGRQLHWLCPSCKQWETVRPIQGVEAE 389