Pairwise Alignments

Query, 389 a.a., lipopolysaccharide assembly protein LapB from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., lipopolysaccharide assembly protein LapB from Ralstonia sp. UNC404CL21Col

 Score =  213 bits (543), Expect = 6e-60
 Identities = 130/406 (32%), Positives = 201/406 (49%), Gaps = 30/406 (7%)

Query: 7   LLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVDN 66
           L +P+    GW      A+Q + +QS  + R Y  GLN LL++Q DKA+D FIE+ ++D 
Sbjct: 9   LAIPLVFGLGWVAARLDARQLRTEQS-SLPRSYFKGLNFLLNEQPDKAIDAFIEVARLDP 67

Query: 67  ETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRA 126
           ET + H ALG+LFR RGE +RAIR+HQNL++R  L   +++ AL +L +D++ +G LDRA
Sbjct: 68  ETTELHFALGSLFRRRGETERAIRVHQNLVNRPDLPPHERDHALFELGQDFLRAGLLDRA 127

Query: 127 EKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIAHFYCEL 186
           E+    L+ E    E A + L  +Y+  +EW KAI+ A  L KL  K   V IA F CE+
Sbjct: 128 EESLRMLM-EGTFAEPAKRVLLELYEVEKEWRKAIDAARELQKLQGKDYAVQIAQFCCEV 186

Query: 187 AMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMVLEQDID 246
           A       +   A++  ++ALQE+PK VRATI LG +     D +  I     + +Q+  
Sbjct: 187 AQEALQRKDVPTAVEWLERALQENPKNVRATIQLGDVAQGQGDIEGAIKRWRSIEQQNTA 246

Query: 247 FIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQEILT 306
           F+  V   L + Y  LGR  + + +LR  +  + G      + +      GI  A  ++ 
Sbjct: 247 FLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDDAVALMR 306

Query: 307 RQLVKNPTMKGFYRLIDYHIAEAEEG----------------------------RAKASL 338
            Q+ + P++    RL++     A E                             +    L
Sbjct: 307 DQIRRQPSLMALTRLVEAEATRASEAVGHEAPATVDVAESALADPVEAGSNADIQRAQDL 366

Query: 339 STLQRLVGEQLKVKPHYRCRKCGFSTHSLYWHCPSCKNWGSIKPIR 384
             ++ L+  + +    Y C++CGF     YW CP C  W +  P R
Sbjct: 367 GAIRDLLQSRTRNLARYTCQECGFRARLFYWQCPGCNRWETYAPRR 412