Pairwise Alignments

Query, 389 a.a., lipopolysaccharide assembly protein LapB from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., lipopolysaccharide biosynthesis regulator YciM from Paraburkholderia graminis OAS925

 Score =  231 bits (590), Expect = 2e-65
 Identities = 134/378 (35%), Positives = 206/378 (54%), Gaps = 3/378 (0%)

Query: 7   LLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVDN 66
           L++P+A A+GW M  R   +    +S  + R Y  GLN LL++Q D+A+D FIE++++D 
Sbjct: 9   LVIPVAFAFGW-MAARYDLKTLLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVVKLDP 67

Query: 67  ETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRA 126
           ET++ H ALGNLFR RGE DRAIR+HQNL+SR+ L + +++ AL +L +D++ +G LDRA
Sbjct: 68  ETVELHFALGNLFRRRGETDRAIRVHQNLLSRADLPVSERDHALFELGQDFLKAGLLDRA 127

Query: 127 EKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIAHFYCEL 186
           E+ F  L +  ++   A + L  IY+  ++W K+I+ A  L  +G + +   IA F+CEL
Sbjct: 128 EETFRSL-ETGDYALGAQRALLTIYEIEKDWIKSIDTARHLETMGAESLDKEIAQFHCEL 186

Query: 187 AMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMVLEQDID 246
           A         ++A +    AL+ +P  VRATI  G +       +  I     V EQ+  
Sbjct: 187 AQEALQHQKPDEARRQLGFALKANPGNVRATILFGDVDAAGGAQEAAIAQWRRVEEQNPA 246

Query: 247 FIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQEILT 306
           ++  V   L + Y  LGR Q+    L   +          +  Q VA   G  AA  +  
Sbjct: 247 YLPLVAEKLMKAYEALGRAQEGADLLTTWVDRYPSNDLLDVAYQHVASLRGPDAAHALAR 306

Query: 307 RQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKCGFSTHS 366
            Q+ K+P + G  RL++   A AEE R ++ L  ++ L+ ++ K  P Y C+ CGF    
Sbjct: 307 SQMQKSPNLAGMTRLLEAQQAVAEEPR-RSELELMRTLIRQRTKNLPRYTCQNCGFRARL 365

Query: 367 LYWHCPSCKNWGSIKPIR 384
            YW CP C  W +  P R
Sbjct: 366 FYWQCPGCSGWETYAPRR 383