Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Cys regulon transcriptional activator CysB from Pseudomonas fluorescens FW300-N2E2

 Score = 96.3 bits (238), Expect = 8e-25
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 8/246 (3%)

Query: 3   LQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPA 62
           L+QLKY V  V    +V+  +  LY +QP I+  ++ LED  G+Q+  R       +TP 
Sbjct: 6   LRQLKYFVTTVECG-SVAEASRKLYIAQPSIASAIKGLEDSFGVQLLIRHHAQGVSLTPG 64

Query: 63  GEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYPRV 122
           G    R A E+L      +  A        G ++I    T A   LP +I GF +R+P V
Sbjct: 65  GARFYRKAQELLRMAREFEQNALADNDVVSGQIDIGCFETVAPLYLPRLIAGFRERFPGV 124

Query: 123 SLHMHQGTPTQMSEAIAKGTANFAIATE---ALHLYQDAIMLPCYHWNRSIVVPKDHPLT 179
            + +  G   ++ + +  G  + AI  E      +  +A+  P   +    ++P  H   
Sbjct: 125 EIRVQDGEQQELVQGLTGGRFDLAIFYEHDLDSTIETEALTAPQRPY---ALLPVGHRFA 181

Query: 180 KKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIG 239
            + QV++ DLA  P++        R+   S F  +G+TP +VF++   ++++  V    G
Sbjct: 182 DQAQVSLRDLALEPMILLDVQ-PSRTYFVSIFEELGLTPNIVFSSPSIEMVRGMVGQSFG 240

Query: 240 VGVIAS 245
             V+ +
Sbjct: 241 FAVLVT 246