Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  101 bits (252), Expect = 2e-26
 Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 4/238 (1%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L+ ++Y++ V  H  N +  AE L+ SQP +S+Q++ LED LG  +F+RSG+ + ++T
Sbjct: 1   MLLRHIRYLLAVAEHR-NFTRAAEALHVSQPTLSQQIKQLEDVLGAPLFDRSGRTV-RLT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE  VR A   L  +E+ K    +      G+L ++ T T   Y +  ++  F   YP
Sbjct: 59  DAGEAYVRYARLALQDLEAAKRAMHDVQDLTRGSLRLAMTPTFTAYLIGPLLARFNSLYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHP-LT 179
            ++L + + T  Q+  A+A+   +  IA    HL  D      +    S+VV + HP   
Sbjct: 119 GLTLSVEEMTQDQIEAALAEDRLDLGIAFTGSHL-ADIDSQTLFAETLSLVVSEAHPRFV 177

Query: 180 KKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMG 237
           +++ +  + L    LV     F  R  +D    + G+ P++V  A     I   VR G
Sbjct: 178 RQQALDAQALGQQSLVLLSGDFATRQHIDLYCRQQGIAPRIVIEANSISAIVEIVRRG 235