Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Chromosome initiation inhibitor from Xanthomonas campestris pv. campestris strain 8004

 Score =  124 bits (312), Expect = 2e-33
 Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 3/282 (1%)

Query: 18  NVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPAGEHIVRIATEILSRV 77
           +VS  AE LY SQP ++ Q++ LE +LG+ +FERSG+ L   +  G+ +  +A  ++  +
Sbjct: 28  SVSRAAEALYVSQPAVTLQLQALERDLGVALFERSGRRLAP-SREGQLLYDMALPLVESL 86

Query: 78  ESIKAVAAEHTHP-EMGTLNISTTHTQARYALPEVIKGFTKRYPRVSLHMHQGTPTQMSE 136
           + ++A   E     + G LNI+   +   Y LP ++  F  R+P V L +H       ++
Sbjct: 87  DGLEAAFREKVRGLDAGELNIAANSSTILYLLPRIVANFRARHPDVRLTLHNAISADGTD 146

Query: 137 AIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTKKEQVTIEDLAAYPLVT 196
            + +   + A+ +  L +  D    P Y + + ++ P DHPL  K  VT+++L+ YPL+ 
Sbjct: 147 LLREDAVDLAVGS-MLDVPADLNYAPVYRFEQLLITPPDHPLASKPIVTLQNLSPYPLIL 205

Query: 197 YVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGVGVIASMAVDKKQDTDL 256
                     +D  F +  +   V       +VIK YV MG+G+ ++ ++ V       L
Sbjct: 206 PPRRQVTYRLVDLIFQQARVPYTVALEVGGWEVIKQYVAMGMGISIVTAICVTDADRDKL 265

Query: 257 VAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRP 298
                   F   +  +  R+G +L      F+E   P L  P
Sbjct: 266 ATRSLKDYFPTRSYGVVVRKGKYLSPQARAFIELIQPDLFTP 307