Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  432 bits (1111), Expect = e-126
 Identities = 207/323 (64%), Positives = 264/323 (81%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           MKLQQL+YI EV +H+LNVSATA++LYTSQPGISKQ+RLLEDELG+++F RSGKHLT+VT
Sbjct: 1   MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           PAGE I+  A EIL +VESIK +A E ++ + GTL+I+TTHTQARYALP VI  F K+YP
Sbjct: 61  PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISNFIKQYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V+LHMHQG+P Q++E  A GT +FAIATEAL  + D +M+PCY WNR +VVP+ HPLTK
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
             ++T+E LA YP+VTYVFGFTGRS+LD AF+  G+ PKVVFTA DADVIKTYVR+ +GV
Sbjct: 181 APKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           G++A MAVD++ D+DLV +DAS +F +S T I FRRGTFLR +M DF+E+FAPHLTR V+
Sbjct: 241 GIVARMAVDEEVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300

Query: 301 EQAISLKSNIEIAEMFKDIDLPV 323
            +AI   +  E+ E+F +++LPV
Sbjct: 301 AKAIQCHNKQEMEELFANVELPV 323