Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  101 bits (252), Expect = 2e-26
 Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L+ L+  VEVV    + S  A+ +  +Q  +SK V+ LEDELG  +  R G H +++T
Sbjct: 1   MNLRTLRTFVEVVRQG-SFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIG-HRSELT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE + R A  +L+    +     +    + G L I      +      +   +  RYP
Sbjct: 59  AAGEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHL-----YQDAIMLPCYHWNRSIVVPKD 175
            + + + +   +++ E +A G    A   +         YQD  + P       +V+ ++
Sbjct: 119 DIDIQLTEHGASKLHECLASGEVELAALLKMNSFSEEFDYQDVRIEPVV-----VVMAEN 173

Query: 176 HPLTKKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVR 235
           HPL K+++V IEDLA  P + +  GF   + +  A +R G+TPKV   +   D I   V 
Sbjct: 174 HPLAKRKRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDLVS 233

Query: 236 MGIGVGVIASMAVDK 250
            G+GV  +  M   K
Sbjct: 234 AGLGVAFLPRMLAQK 248