Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 7/253 (2%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L +L+YIV +     +    AE  + SQP +S  V+ LEDELG+ IFERS K   ++T
Sbjct: 1   MTLTELRYIVTLAQEQ-HFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERS-KSAVRLT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           P GE IV  A ++L + + I+ +A    +     L +   +T   Y  P +I    +  P
Sbjct: 59  PVGEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           ++ L++ +     + + +  G  +  I     +   D + LP Y    S+++P DHP T+
Sbjct: 119 QMPLYIEENFTHVLRDKLRNGELDAVIIALPFN-EADVLTLPLYDEPFSVLMPADHPWTQ 177

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGM----TPKVVFTATDADVIKTYVRM 236
           KE +    L    L+    G   R ++  A   +G            ++  + I+  V  
Sbjct: 178 KETIDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVAS 237

Query: 237 GIGVGVIASMAVD 249
           G+G+ ++   AVD
Sbjct: 238 GLGISILPLSAVD 250