Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transcriptional regulator, LysR family from Synechococcus elongatus PCC 7942

 Score =  102 bits (254), Expect = 1e-26
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 7/254 (2%)

Query: 3   LQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPA 62
           L QL+ I+  +    +    A++LY SQP +S QV+ LE +L + +F+R G+   Q+T A
Sbjct: 8   LDQLR-ILRAIAAEGSFKRAADSLYVSQPAVSLQVQNLERQLNVPLFDRGGRR-AQLTEA 65

Query: 63  GEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYPRV 122
           G  ++     ILS          +  + + GTL I  + T   Y LP +I  F +RYP V
Sbjct: 66  GHLLLSYGERILSLCAETCRAIEDLQNLQGGTLIIGASQTTGTYLLPRMIGRFRQRYPDV 125

Query: 123 SLHMHQGTPTQMSEAIAKGTANFAI--ATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           ++ +H  +  + S ++A G  + AI        L    + +P      ++++P  HPLT+
Sbjct: 126 AVQLHVHSTRRTSWSVANGQIDLAIIGGEVPTELQDSLVTIPYAEDELALILPVSHPLTQ 185

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTP---KVVFTATDADVIKTYVRMG 237
           +  +  EDL     +      T R  +D   +R G+     ++       + IK  V+ G
Sbjct: 186 QASIQREDLYKLQFIALDSQSTIRKVIDQVLSRSGIETRRLRIEMELNSIEAIKNAVQAG 245

Query: 238 IGVGVIASMAVDKK 251
           +G   ++  A++K+
Sbjct: 246 LGAAFVSVSAIEKE 259