Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., transcriptional regulator CysB (RefSeq) from Shewanella amazonensis SB2B

 Score =  484 bits (1245), Expect = e-141
 Identities = 234/324 (72%), Positives = 278/324 (85%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           MKLQQL+YI EVVNHNLNVSATAENLYTSQPGISKQVR+LEDELGIQIF RSGKHLT VT
Sbjct: 1   MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           PAGE ++ IA +IL +VESIK VA E+T P+ G LNI+TT TQARYALP +IKGF KRYP
Sbjct: 61  PAGEQVIAIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPHIIKGFIKRYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V+LHMHQGTPTQ+SE  A+G A+FAIATEA+HLY D IMLPCYHWNRSIVV +DHPL  
Sbjct: 121 KVNLHMHQGTPTQISELAARGEADFAIATEAMHLYSDLIMLPCYHWNRSIVVTRDHPLAG 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           + Q++IE+LA YPLVTYVFGF   SE++ AFNR G+ P++VF+AT ADV+KTYVR+G+GV
Sbjct: 181 RSQISIEELARYPLVTYVFGFDRASEIERAFNRAGLEPRLVFSATSADVLKTYVRLGLGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           GV+ASMA+D   D DLVAIDASH+F+ STT IGFR+G+FLRSYM+DF+E FAPHLTR VV
Sbjct: 241 GVLASMAIDPNIDRDLVAIDASHLFAHSTTKIGFRKGSFLRSYMYDFIELFAPHLTRDVV 300

Query: 301 EQAISLKSNIEIAEMFKDIDLPVR 324
           E+A++L+  I I EMF D +LP+R
Sbjct: 301 EKAVALRDPILIEEMFADRELPIR 324