Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 13/266 (4%)

Query: 3   LQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPA 62
           L+QL+YIV V +  LN    AE    SQP +S Q+  +E  LG+ +FER+ + +  +TP 
Sbjct: 4   LRQLRYIVAVAD-TLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVV-LTPI 61

Query: 63  GEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYPRV 122
           G  I   A  +L     I  +A     P  G L +    T   Y LP V+  F +++P +
Sbjct: 62  GREIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSL 121

Query: 123 SLHMHQGTPTQMSEAIAKGTANFAIAT----EALHLYQDAIMLPCYHWNRSIVVPKDHPL 178
            L++ +    ++   +  G  +  +      +A     D    P +     +  P DH L
Sbjct: 122 RLYLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLW-----LAAPPDHAL 176

Query: 179 TKKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGI 238
             + +V++EDLA   L+    G   R E+     RVG      F AT  D ++  V   I
Sbjct: 177 ADRTRVSVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQMVASRI 236

Query: 239 GVGVIASM--AVDKKQDTDLVAIDAS 262
           G+ ++  +  A +  QD ++  I  S
Sbjct: 237 GLALLPDLYVAAEAAQDPNIRMIPFS 262