Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 24/267 (8%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M+++ L+Y   V  H LN +A AE+L  +QP +S+Q+R LE E+G  +FER+ + +  +T
Sbjct: 1   MEIRHLRYFAAVARH-LNFTAAAESLGVAQPPLSQQIRDLEAEIGTPLFERTTRRVA-LT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE  ++ A  IL R ++    A        G LN+  T +     L   I+ F   YP
Sbjct: 59  RAGEDFLKQALAILERADNAVQRARSIGAGTAGILNVGLTGSVLTGPLGRAIQQFALNYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSI--VVPKDHPL 178
            V L +H+ +P +   A+  G  + +         QDA +     W  S+  V+PK H L
Sbjct: 119 NVDLRIHEMSPDRQVAALKSGQTDVSFLRCP---PQDAEIASELAWRESVRLVLPKGHAL 175

Query: 179 TKKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNR--------VGMTPKVVFTATDADVI 230
           + + +VT+ DL     V        R E DS F +         G  P+V   A ++  +
Sbjct: 176 SAR-KVTLADLRDESFVFL------RLE-DSLFAKYLWQCCFEAGYAPRVTHQAIESTSL 227

Query: 231 KTYVRMGIGVGVIASMAVDKKQDTDLV 257
            + V  G+GV +I    V K    D+V
Sbjct: 228 TSLVAAGLGVAIIPEF-VSKLAHPDVV 253