Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., transcriptional regulator CysB (RefSeq) from Shewanella loihica PV-4

 Score =  469 bits (1207), Expect = e-137
 Identities = 225/324 (69%), Positives = 272/324 (83%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           MKLQQL+YI EVVNHNLNVSATAENLYTSQPGISKQVR+LEDELGIQIF RSGKHLT VT
Sbjct: 1   MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           PAG+ ++ IA +IL +VESIK VA E+T P+ G LNI+TT TQARYALP +I+ F  RYP
Sbjct: 61  PAGQQVINIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPGIIRAFIDRYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V+LHMHQGTP+Q+SE  A+G A+FAIATE +HLY D IMLPCYHWNRSIVV KDHPL  
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYTDLIMLPCYHWNRSIVVTKDHPLAS 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           + Q++IEDL  +PLVTYVFGF   SE++ AFNR G+ P+VVFTAT ADV+KTYVR+G+GV
Sbjct: 181 RTQISIEDLGRFPLVTYVFGFDRESEIEKAFNRAGIDPRVVFTATSADVLKTYVRLGLGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           GVIASMAVD   D DLVAIDASH+F+ STT IGFR+G FLR+YM++F+E FAPHLT+ +V
Sbjct: 241 GVIASMAVDPVIDKDLVAIDASHLFAHSTTKIGFRKGNFLRNYMYEFIEHFAPHLTKDIV 300

Query: 301 EQAISLKSNIEIAEMFKDIDLPVR 324
           E+A++L+    I  +F D++LP+R
Sbjct: 301 EKAVALRDPQLIENLFADVELPIR 324