Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., cys regulon transcriptional activator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  470 bits (1209), Expect = e-137
 Identities = 226/324 (69%), Positives = 273/324 (84%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           MKLQQL+YI EVV HNLNVSATAENLYTSQPGISKQVR+LEDELGIQIF RSGKHLT VT
Sbjct: 1   MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           PAG+ ++ IA +IL +VESIK V+ E+T P+ G LNI+TT TQARYALP +I+ F  RYP
Sbjct: 61  PAGQQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPNIIRQFIDRYP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V+LHMHQGTP+Q+SE  A+G A+FAIATEA+HLY D IMLPCYHWNRS+VVPKDHPL  
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKDHPLAT 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           + Q++IEDLA +PLVTYVFGF   SE++ AFNR  + P+VVF+AT ADV+KTYVR+G+GV
Sbjct: 181 RTQISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
           GVIASMA+D   D DLVAIDA H+F+ STT IGFR+G+FLRSYM+DF++ FAPHLTR VV
Sbjct: 241 GVIASMAIDPNIDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTRDVV 300

Query: 301 EQAISLKSNIEIAEMFKDIDLPVR 324
           E+A++L+    I EMF D +LP+R
Sbjct: 301 EKAVALRDQQLIDEMFADKNLPMR 324